KEGG   Oceanimonas sp. GK1: GU3_01145
Entry
GU3_01145         CDS       T01667                                 
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
oce  Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:oce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oce03009]
    GU3_01145
Enzymes [BR:oce01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     GU3_01145
Ribosome biogenesis [BR:oce03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    GU3_01145
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 DUF5818
Other DBs
NCBI-ProteinID: AEX99985
UniProt: H2FYM9
Position
231289..231972
AA seq 227 aa
MRLDKFICKSTELSRSEARRAIAAGEARVNGEPVTHEAAQVHENNLVTLAGQRLVPRPFR
YLMMHKPTGTLCSNVDGVYPSLFRWLDIDRPDELHIVGRLDADTTGLVLLTDDGRWSFTI
TRPEQHCAKVYRVGLRDPLAEQTAARFAQGLLLQGENKPTQPARVEASGPREALLTITEG
RFHQVKRMFAAVGNRVVSLHREQIGGIRLNVPPGQWRPLSQAEIDGV
NT seq 684 nt   +upstreamnt  +downstreamnt
atgcgcctcgataaattcatctgcaaaagcaccgaactgagccggtccgaggcccggcgg
gccattgcggccggcgaggcccgggtcaacggtgagccagtcacccatgaggcggcccag
gtgcacgaaaacaacctggtgaccctggccggccagcggctggtgccccgccccttccgt
tacctgatgatgcacaagcccaccggcaccctgtgctccaatgtggacggcgtctatccg
tcgctgtttcgctggctggatatcgaccggcccgatgagctgcacattgtcggccgcctc
gacgccgacaccaccggcctggtgctgctcaccgacgacggccgctggtcgtttactatc
acgcgccccgagcagcactgcgccaaggtataccgggtcggcctgcgggatccgctggcg
gagcagaccgccgcccgctttgcacagggcctgttgttgcagggggaaaacaagcccact
cagcccgccagggtcgaagccagcggcccccgcgaggcgctgctgaccattaccgagggc
cggtttcatcaggtcaagcgcatgtttgcggcggtgggcaaccgggttgtcagcctgcat
cgagagcagattggcggcattcggctgaatgtgcccccggggcagtggcgccccctgagc
caggccgagattgacggcgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system