KEGG   Oceanimonas sp. GK1: GU3_02435
Entry
GU3_02435         CDS       T01667                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
oce  Oceanimonas sp. GK1
Pathway
oce00300  Lysine biosynthesis
oce00470  D-Amino acid metabolism
oce01100  Metabolic pathways
oce01110  Biosynthesis of secondary metabolites
oce01120  Microbial metabolism in diverse environments
oce01230  Biosynthesis of amino acids
Module
oce_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:oce00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GU3_02435 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GU3_02435 (dapF)
Enzymes [BR:oce01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GU3_02435 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AEY00244
UniProt: H2G103
Position
516923..517732
AA seq 269 aa
MQGLGNDFMVVDGVTQKVFFNPEVIRQLADRHFGVGFDQLLLVEPPYDPELDFHYRIFNA
DGSEVEQCGNGARCFARFVRLKGLTNKDRIAVSTQKGNIVLQLEKDDQVTVNMGVPEFDP
AHIPFKAQKAEKTYLVRAQEQTVLCGAVSMGNPHCVVEVDDINTDMVATLGPELENHERF
PARVNVGFMQIVNAREIKLRVHERGAGETLACGTGACAAAVMGMSWGKLAERVKVQLPGG
TLTIAWQGPGKPVFMTGPAKHVFDGQISL
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcaggggctgggcaacgacttcatggtggtggacggcgtcacccagaaggtctttttc
aatcccgaggtgatccgccagctggcggatcgtcactttggcgtgggctttgaccagctg
ctgctggtggagccgccctatgatcccgagctcgactttcactaccgcatcttcaatgcc
gacggctccgaggtggagcagtgtggcaacggcgcccgctgctttgcccgttttgtgcgg
ctcaagggcctgaccaacaaggaccgtattgccgtcagcactcaaaagggcaatatcgtg
ctgcagctggaaaaggacgatcaggtcaccgttaacatgggggtgcccgagttcgatccg
gcgcatattccgttcaaggcccagaaggcggaaaaaacctacctggtgcgcgctcaggag
cagacggtgctgtgcggcgccgtgtccatgggcaacccccactgtgtggtggaagtggac
gacatcaacaccgatatggtggcgactcttgggccggagctggaaaatcacgagcgtttt
ccggcccgggtgaacgtgggctttatgcagatcgtcaatgcccgggaaatcaaactccgg
gtgcacgagcgcggcgccggtgaaaccctggcctgcggtaccggcgcctgtgcggcggcg
gtgatgggcatgagctggggcaagctggcggagcgggtgaaggtacaactgcccggcggc
acgctcaccatcgcctggcaggggccgggcaagccggtgttcatgaccggcccggccaag
cacgtgtttgacggacagatcagcctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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