KEGG   Oceanimonas sp. GK1: GU3_04600
Entry
GU3_04600         CDS       T01667                                 
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
oce  Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:oce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oce03021]
    GU3_04600
Transcription machinery [BR:oce03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GU3_04600
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20 HTH_16
Other DBs
NCBI-ProteinID: AEY00677
UniProt: H2G0A4
Position
996505..997083
AA seq 192 aa
MSENLTDQQLIERVQRGDKNAYNLLVKKYQYKVANLVSRYVSNPGDVPDVTQEAFIKAYR
ALPGFRGDSAFFTWLYRIAVNTAKNHLVSQRRRPPGSDVEVDDAEYYGGGDALKELASPE
SLMLTEEIRRAVYETIDGLPDDLKTAITLRELEGMSYEDIASVMDCPVGTVRSRIFRARE
AIDKRVTPLLRS
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagcgaaaatttgacggatcagcaactgatcgagcgggttcagcggggtgacaagaat
gcgtataacctgctggtgaaaaaatatcagtacaaagtggcgaacctggtgtcccgttac
gtgtccaaccccggagacgtccccgatgtgacccaggaggcctttatcaaggcttatcgg
gcattacccggttttcgtggcgacagtgcctttttcacctggctgtatcgcattgcggtc
aacaccgccaagaaccatctggtgtcgcagcggcggcgcccgccggggtcggacgtggag
gtggacgacgccgagtattacggcggcggcgatgccctcaaggagctggcttcgccggaa
agcctgatgctgaccgaagaaatccgccgggccgtgtatgaaaccatagacgggctgccg
gacgacttgaaaacggcaatcacactgcgagagctggaagggatgagctacgaagacatt
gcgagtgtcatggactgtccggtaggcaccgtccgttcacgcatctttcgggctcgggaa
gcgattgacaagcgggtgacccccttacttcggagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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