KEGG   Oceanimonas sp. GK1: GU3_08525
Entry
GU3_08525         CDS       T01667                                 
Name
(GenBank) histone-like DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
oce  Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:oce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oce03032]
    GU3_08525
   03036 Chromosome and associated proteins [BR:oce03036]
    GU3_08525
   03400 DNA repair and recombination proteins [BR:oce03400]
    GU3_08525
DNA replication proteins [BR:oce03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GU3_08525
Chromosome and associated proteins [BR:oce03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GU3_08525
DNA repair and recombination proteins [BR:oce03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GU3_08525
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-DNA_bdg HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AEY01461
UniProt: H2FU94
Position
1861955..1862227
AA seq 90 aa
MNKSQLIDRIADGADITKASAGRALDAFVEAITETLKDGDSVSLVGFGTFEVRERAARTG
RNPQTGATIEIAAAKTPAFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaatctcaactgattgacagaatcgccgacggcgccgacatcaccaaggcctct
gccggccgtgcgctggacgccttcgtggaagcgattaccgaaaccctgaaagacggtgac
tctgtctctctggttggctttggcacctttgaagtacgcgagcgtgccgcccgtaccggc
cgtaacccgcaaaccggcgccaccattgaaattgccgctgccaagaccccggccttcaag
gccggcaaggcactgaaagacgccgttaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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