KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c00290
Entry
OCA5_c00290       CDS       T01617                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocg03016]
    OCA5_c00290 (truB)
Enzymes [BR:ocg01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     OCA5_c00290 (truB)
Transfer RNA biogenesis [BR:ocg03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    OCA5_c00290 (truB)
 Prokaryotic type
    OCA5_c00290 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: AEI04763
UniProt: B6JCS0
Position
31795..32874
AA seq 359 aa
MSPTGQNPANAPQTGESIAADQNNFSTPPNGGHPHGKGQRGQRQQKRERRDVHGWVVLDK
PVGMTSTQAVAVLKRLFNAKRVGHAGTLDPLASGGLPIALGEATKTVPFVMDGRKRYRFT
VQWGEERDTDDSEGRPTQTSDARPTPEAIQAVLPQFSGTILQTPPQFSAIKIQGERAYDL
ARDGETVALQPREVEIHELILVDQPDSGHSVFEAECGKGTYVRALARDMGRLLGCYGHIV
ALRRTQCGPFDEADMIPLAELEALCDRAASGEGSLADALLPVETALDDIPALAVTRADAA
RLARGQAVLLRGRDAPILNGTVYVTVGGRLLALAELGNGELIPKRVFNLTGLVASPDRN
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgagcccgacaggccagaatcccgcaaacgcgccgcaaaccggcgagtccatcgccgcc
gatcaaaataatttttccacgcctcccaacggcggacatccgcacggcaagggacaacgc
ggccagcgccagcagaagcgcgaacgccgcgacgtccatggctgggtcgtgctcgacaag
ccggttggaatgacctcgacccaggcggtggcggtgctgaagcgtctgttcaacgccaag
cgtgtcggccatgccggcacgctcgatccgctcgcctccggcggtctgccgattgctctt
ggggaagcgaccaagaccgtccccttcgtgatggatggccgcaagcgctaccgcttcaca
gtgcagtggggcgaggagcgcgacaccgacgacagcgaaggccgcccgacccagaccagc
gacgcccgcccgacccccgaggcgatccaggccgtgctgccgcagttcagcgggaccatc
ctgcagaccccgccgcagttctcggcgatcaagatccagggcgagcgcgcctatgacctc
gcccgcgacggcgaaaccgttgccttgcagccccgtgaggtcgaaattcacgaattaatc
cttgtcgatcagccggatagcggccactccgtgttcgaggccgaatgcggcaagggaacc
tatgtccgggcgctcgcccgcgacatgggccgcctcctcggctgctacggccacatcgtg
gctctgcggcggacccagtgcggcccgttcgacgaggctgacatgattccgctggcggaa
ttggaggctttgtgcgatagagccgcgtctggcgagggcagcctcgccgacgcgctattg
cccgttgagaccgcgctggacgacatcccggcactggccgtcacacgggcggatgccgca
aggcttgcaagaggccaagcggttttgttgcgcggacgggatgcgccaattctcaacggc
acagtctatgtcactgtcggaggacggcttctggccctcgccgagcttggcaatggcgaa
ctcatccccaagcgcgtgttcaacctcaccgggctcgttgcgagtccggaccgcaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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