KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c03230
Entry
OCA5_c03230       CDS       T01617                                 
Symbol
trbC
Name
(GenBank) putative conjugal transfer protein TrbC
  KO
K20528  type IV secretion system protein TrbC
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA5_c03230 (trbC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ocg02044]
    OCA5_c03230 (trbC)
Secretion system [BR:ocg02044]
 Type IV secretion system
  Trb secretion system protein
   OCA5_c03230 (trbC)
SSDB
Motif
Pfam: TrbC bPH_10 PAP2
Other DBs
NCBI-ProteinID: AEI05052
UniProt: B6JA74
Position
330990..331322
AA seq 110 aa
MIRTFARGCHTMATAAAAVSISVLFTQAAHASGSSMPWEAPLQSILQSIEGPVAKIIAVI
IIIVTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGAVI
NT seq 333 nt   +upstreamnt  +downstreamnt
atgatccgcaccttcgcgcgcggctgccacaccatggcgaccgccgctgccgctgtttcc
atcagcgtgcttttcacccaggccgctcacgcctccggctcctcgatgccgtgggaagcg
ccgctgcaatccatcctccaatcgatcgaggggccggtggcgaagatcatcgccgtgatc
atcatcatcgtcaccggtctgacgctggcattcggcgacacctcaggcggattccgccgc
ctgatccagatcgtcttcggcctgtcgatcgcgttcgcggcgtcgagcttcttcctgtcc
ttcttctcgttcggcggcggggcggtgatctga

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