KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c03280
Entry
OCA5_c03280       CDS       T01617                                 
Symbol
trbF1
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA5_c03280 (trbF1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ocg02044]
    OCA5_c03280 (trbF1)
Secretion system [BR:ocg02044]
 Type IV secretion system
  Trb secretion system protein
   OCA5_c03280 (trbF1)
SSDB
Motif
Pfam: VirB8 wHTH-PRTase_assc
Other DBs
NCBI-ProteinID: AEI05057
UniProt: B6JA68
Position
336500..337189
AA seq 229 aa
MSVFKRPAAHYGKTPEPVTPYQKAAQVWDERIGSARVQAKNWRYMAFGSLILSAGFAAAL
VWQSARGTVVPWVVQVDRLGQAQSVAPATADYRPSDPQIAWHLGRFIEQVRSIPADAIIV
RQNWLRAYEWTTDRGAAALNDYARANDPFTKVGRRQVAVEVSSVIRASPDSFRVAWTERH
YENGQLAVTERWTAILTIVIQTPRDADRLRANPLGIYVNAISWSREMTP
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagcgttttcaagcgacccgccgcccactatggcaagacacccgaacccgtcacgccc
tatcagaaggccgcgcaagtctgggacgagcgcatcggctcggcccgtgtccaggccaag
aactggcgctatatggccttcgggtcattgatcctctcggccggctttgccgccgcattg
gtttggcagtccgcacgcggaacggtcgtgccttgggttgttcaggtcgaccgcctgggc
caggcccaatccgtcgctcccgcgactgccgactatcgcccttccgatccccagatcgcc
tggcatcttggtcgcttcatcgaacaggtccgctccattccggccgacgcgatcatcgtc
cggcagaattggctgcgagcctatgaatggacgaccgatcgcggcgcggcggctctcaac
gactacgctcgcgccaacgaccccttcaccaaagtcggccgccgccaggtcgccgtcgag
gtctccagcgtcatccgcgcctctccggactcgttccgcgtcgcttggacggaaagacac
tacgagaatggccagcttgccgtgaccgaacgctggaccgcgatcctgaccattgtgatc
cagacgccgcgcgacgcggaccgtctgcgcgccaatccgctggggatttacgtcaatgca
atttcctggtcgcgggagatgacgccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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