KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c05420
Entry
OCA5_c05420       CDS       T01617                                 
Symbol
trbF2
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA5_c05420 (trbF2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ocg02044]
    OCA5_c05420 (trbF2)
Secretion system [BR:ocg02044]
 Type IV secretion system
  Trb secretion system protein
   OCA5_c05420 (trbF2)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: AEI05266
UniProt: B6JJV7
Position
567123..567812
AA seq 229 aa
MNLFRRPATHYGKTPQPETPYQRAAQVWDDRIGSARVQARNWRLMAFGSLILSAGFASAL
VWQSARGTVVPWVVQVDKLGQAQAVAAATADYRPTDPQVAWHLARFIEQVRSIPADPIIV
RQNWLRAYDWTTDRGAAALNDYARGNDPFTKVGKQQIAVEVSSVIRASADSFRVAWTERH
YENGQLSTTERWTAILTIAIQPPRDAERLKANPLGIYINAINWSREMSQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgaatctgttcaggcgacccgccacgcattacggcaagaccccgcaacccgaaacgcca
tatcagcgcgccgcacaggtctgggatgaccgtatcggctcggcccgcgtgcaggcgagg
aactggcggctcatggccttcggatcactgatcctgtcggccggtttcgcttccgccctg
gtctggcagtctgcgcgcgggaccgtcgtgccgtgggtggtgcaggtggacaagctcggc
caagcacaggccgtcgcagcagccacggccgattaccggccgaccgacccgcaagtggcg
tggcatctggcgcgcttcatcgagcaagtccgctcgatcccggccgatccgatcatcgtg
cggcaaaactggctccgggcctacgactggacgaccgatcgcggcgcggcggcgctcaac
gattacgcgagggggaacgacccattcaccaaagtcggcaagcagcagatcgccgttgaa
gtctccagtgtcatccgcgcttcggcggattccttccgcgtcgcctggaccgaacgtcac
tacgagaacgggcagctctccaccacggagagatggacggcgatcctgaccatcgcgatc
cagccgccgcgcgatgccgaacggctgaaggccaatccgttgggaatctacatcaatgca
atcaactggtcgcgggagatgagccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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