KEGG   Ochrobactrum quorumnocens: CES85_0019
Entry
CES85_0019        CDS       T05040                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
och  Ochrobactrum quorumnocens
Pathway
och03030  DNA replication
och03430  Mismatch repair
och03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:och00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CES85_0019 (dnaX)
   03430 Mismatch repair
    CES85_0019 (dnaX)
   03440 Homologous recombination
    CES85_0019 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:och03032]
    CES85_0019 (dnaX)
   03400 DNA repair and recombination proteins [BR:och03400]
    CES85_0019 (dnaX)
Enzymes [BR:och01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CES85_0019 (dnaX)
DNA replication proteins [BR:och03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CES85_0019 (dnaX)
DNA repair and recombination proteins [BR:och03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CES85_0019 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_gamma3 DNA_pol3_delta2 DUF3646 AAA AAA_22 RuvB_N AAA_16 AAA_30 AAA_14 AAA_5 AAA_19 AAA_18 AAA_24 TsaE SRP54 VapE-like_dom DUF815 AAA_2 Rad17 CbiA ABC_tran RNA_helicase nSTAND3 AAA_33 AAA_assoc_2 SKI AAA_28
Other DBs
NCBI-ProteinID: ASV87112
UniProt: A0A248UKG0
Position
1:20299..22125
AA seq 608 aa
MDTKSADLAADGAYRVLARKYRPQNFNDLIGQEPMVRTLKNAFETGRIAQAWMLTGVRGV
GKTTTARILARALNYKTDSIDQPTIDLSVLGEHCQAIMEGRHVDVIEMDAASHTGIDDIR
EIIEQVRYRPVSARYKVYIIDEVHMLSNQAFNGLLKTLEEPPPHVKFIFATTEIRKVPIT
VLSRCQRFDLRRIESGTLAAHLRRIAEAEQIQVDDTSLAMIARAGEGSARDSLSIFDQAI
AHGAGHVSAEAVRSMLGLADRARIIDLFEMLMCGDVAGALTEFRAQYDVGADPSVVLTDL
ADFNHLVTRLRFTPDVAEDVSLSEDERVRGRDFSQKLSVRVLSRTWQMLLKGIAEVDTAT
RPIQAAEMLLIRLAHAADLPTLDEALKGLENGSVSASRPQPSGGAKPNGGSQSEARVNAD
AIASSMMPVSGGPATAMRLVETQPQPVQPPAPQQFVDNTPQPSVPINSLADIVALADKYR
DMQFKILVKNCVRLSSIAAGRLEIGLTDDAPKSLPSDISQRLLNWTGIRWIVTVARDVSG
QTVAEAETERRDNLVTDARADPDVAAILAAFPGAKITDVRIAVAEQSDDDDIDLDTIEDV
PGAPSDDD
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggacacgaaatccgcagacttggccgccgatggcgcctaccgcgttctcgcccgcaaa
tatcgtcctcagaattttaatgatcttatcggtcaggagccgatggttcgcacgctgaaa
aatgcgttcgagactggccgcattgcgcaggcctggatgttgaccggtgtgcgcggtgtg
ggcaagaccacgacggcgcgcattctggcgcgtgcactcaattacaagactgattctatt
gaccagccgacaatcgatctgtcagtgcttggcgaacattgtcaggctatcatggaaggc
cgccatgtcgatgtgatcgaaatggatgcggcctcccatacgggtatcgatgatatccgc
gagattatagagcaggtgcgttatcgccctgtttcggcacgctacaaagtctacatcatt
gacgaagtgcacatgctgtccaatcaggccttcaacggccttttgaagacgcttgaagaa
ccgccgccgcacgtcaaattcatctttgctaccaccgaaatccgaaaagttccgatcacg
gtcctgtcgcgttgtcagcgttttgatctgcgccgcatcgaatcgggcactttggccgca
catctgcggcggattgcggaagccgaacagatccaggtcgacgatacatcgcttgcgatg
attgcgcgcgcgggcgaaggctcggcccgcgattcgctctccatcttcgatcaggcgatt
gcccatggcgctggtcatgtttcggcagaggcagtgcgttccatgctgggtcttgccgac
cgtgcgcgcattatcgatctcttcgagatgctaatgtgtggcgatgtggctggcgctctg
accgaatttcgtgcgcaatatgacgtcggtgctgatccgtcggtcgtgctgactgatctc
gcagacttcaatcatctggtgacgcgcctgcgcttcacgcctgacgttgcggaagatgtt
tcgctgtcggaagatgagcgtgtgcgtggccgcgatttttcgcaaaagctttcggtccgt
gtgctttcgcgcacatggcagatgctgctcaagggcattgcggaagtcgacaccgcaacc
cgtcctattcaggcagctgaaatgctgttgatccgtctggcgcatgctgccgatttgcca
acgctcgatgaagcgctgaagggactggagaacggttcggtttcggcatcgcgtccgcag
ccatcgggtggagcaaagcctaatggtggctctcagtccgaggcacgggtaaatgcggat
gcaattgcgtcgtccatgatgcccgtatcgggtggacctgcgactgcgatgcgccttgtg
gaaacacagccgcagccagtacagcctcctgcgccccagcaattcgtcgataatacgccg
cagccttctgttccgatcaacagccttgctgatatcgttgctctggctgacaagtatcgt
gacatgcagttcaagattctggtcaagaactgcgtgcgattgtcatccatcgccgccggg
cggcttgaaatcggcctgacggatgatgcaccgaaatcattgccgagcgatatctcgcag
cgcctgcttaactggaccggcattcgctggattgtgaccgtagcgcgtgatgtttcagga
cagacggttgcggaagctgaaaccgagcgtcgcgacaatcttgtcaccgatgcgcgggca
gacccggatgttgccgccattttggctgcttttcctggcgcaaagattacggatgtccgt
attgccgttgcagaacagagtgacgatgacgatattgatctggatacgattgaagacgtg
cctggcgcgccttctgacgacgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system