KEGG T05040: CES85

Ochrobactrum quorumnocens: CES85_4815

Entry

CES85_4815        CDS       T05040

Symbol

codA

Name

(GenBank) cytidine and deoxycytidylate deaminase

K11991

tRNA(adenine34) deaminase [EC:3.5.4.33]

Organism

och Ochrobactrum quorumnocens

Brite

KEGG Orthology (KO) [BR:och00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:och03016]
    CES85_4815 (codA)
Enzymes [BR:och01000]
3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.33  tRNA(adenine34) deaminase
     CES85_4815 (codA)
Transfer RNA biogenesis [BR:och03016]
Prokaryotic type
  tRNA modification factors
   Deaminases
    CES85_4815 (codA)

SSDB

Motif

Pfam:

MafB19-deam dCMP_cyt_deam_1 Bd3614-deam SNAD4 APOBEC2 NAD1 APOBEC_N NAD2 APOBEC4_like

Other DBs

NCBI-ProteinID:

ASV84024

UniProt:

A0A248UBF7

Position

2:1029399..1029827

AA seq 142 aa
MEIALEEAKSAALRGEVPIGAVIVHEGKIIARAGNRTRELNDVTAHAEVLVIRQAGEALK
SERLLDCDLYVTLEPCAMCAAAISFARIRRLYYGAADPKGGAVEYGPRFYTQPTCHHVPE
IYAGFSEEKSQKILRDFFRDKR

NT seq 429 nt +upstreamnt +downstreamnt
atggagattgcgcttgaagaggcgaaatctgcagccctccgcggcgaggtgcccattggt
gcggtcatcgtgcatgaaggcaagattattgcccgggcaggcaaccgtacgcgcgaattg
aacgacgtcacggcgcatgcggaagtacttgtaattcgtcaggcaggagaagcacttaag
tccgaacgcttgctcgactgcgatctctatgtgacgcttgaaccctgtgcaatgtgtgca
gccgctatctcttttgctcgcatccggcgtctttattatggcgctgctgatcccaaggga
ggggctgtggaatatgggccacgcttctacacacaacccacatgccatcacgttccagaa
atttatgcgggtttctccgaagaaaaatcccagaaaatcctccgggatttttttcgcgat
aagcgatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

Download RDF

DBGET integrated database retrieval system