KEGG   Oceanisphaera avium: CBP12_00250
Entry
CBP12_00250       CDS       T04855                                 
Name
(GenBank) 23S rRNA pseudouridine synthase F
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
ocm  Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:ocm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ocm03009]
    CBP12_00250
Enzymes [BR:ocm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     CBP12_00250
Ribosome biogenesis [BR:ocm03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CBP12_00250
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ART78774
UniProt: A0A1Y0CUT0
Position
56304..57296
AA seq 330 aa
MTESVSSHAEPLMPLTRLNKFISETGICSRREADRLIEQGCVKVNGTIAGMGVKVSAADE
VSVNNKPLRAKPAPVYLVYNKPIGITCTTDPEIAENIVDAVNYKKSRIFPIGRLDKPSSG
LILLTNDGDIVNKILRAGNAHEKEYIVSMDKPITADFVARMAAGVPILDTITKPCKVKKI
GHNTINIILTQGLNRQIRRMASYLDFNVTSLKRVRIMNIDLGELRPGQWRYVTESELALI
NAMISDSSNTEEASQLEQPKAARSGPRIKDVAQPANRRARHAAQPHSPSRKPSRAGGKAG
AKNGPSTQAAGKGRSSSKGSLPKNARNKRP
NT seq 993 nt   +upstreamnt  +downstreamnt
atgacagagtcggtttcctcccacgccgagcccttaatgccactgacgcggcttaataaa
tttattagcgaaacgggcatctgctcacgccgagaagcggatcgcttaattgaacaaggc
tgcgttaaggtaaatggcactatcgcgggcatgggcgtaaaagtcagtgcggcagatgaa
gtaagcgttaataataagccgctgcgggctaagccagcgccagtgtatttggtctataac
aagccgattggcattacttgcaccacggatcctgagatcgcagaaaatatcgtggatgcg
gttaattataaaaaatcacgcatttttcctatcggtcgcctcgataagccctctagcggt
ttaattttactgactaacgatggcgatattgtgaataaaattttgcgcgccggtaatgcg
catgaaaaagaatatattgtgtccatggataagcccattaccgccgattttgtagcacgc
atggcggccggtgtgcctatcttggataccattactaagccgtgtaaggttaaaaaaatt
ggccataacaccattaatatcatcttaactcagggcttaaatcgccaaattcggcgcatg
gccagttatcttgattttaatgtgactagcttaaagcgggtgcggatcatgaatatagac
ttaggtgagttaaggcctggtcagtggcgctatgtcactgagtctgaattagctttgatc
aacgctatgatcagcgactccagtaacaccgaagaagcctcacaactggagcaacctaaa
gcggcgcgcagtggcccgcgtattaaagatgttgcccaaccggcaaaccgtcgagctcgc
cacgcagctcagccccattcaccgtctcgaaagcccagtcgggcgggtggcaaagcgggg
gctaaaaatggcccaagtacgcaagccgctggtaaaggccgtagctccagtaaaggatcc
ttgccaaagaatgctcgtaataaacgcccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system