KEGG   Afipia carboxidovorans OM4: OCA4_c03240
Entry
OCA4_c03240       CDS       T01967                                 
Symbol
trbJ1
Name
(GenBank) P-type conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oco00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA4_c03240 (trbJ1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:oco02044]
    OCA4_c03240 (trbJ1)
Secretion system [BR:oco02044]
 Type IV secretion system
  Trb secretion system protein
   OCA4_c03240 (trbJ1)
SSDB
Motif
Pfam: DUF4141 DUF948 Zw10_N LIN37 LXG 7tm_7 FapA
Other DBs
NCBI-ProteinID: AEI01479
Position
334071..334838
AA seq 255 aa
MKTYRSPRRALMLAATMLATPLAVSPILSTPAAAQWVVYDPTNYAQNVLTAARSLEQINN
QIRSLQNEAQGLINQARNLTSLPYSSLQQLQQNVQRTQQLLRQAQNIAYDVQNIDQMFQQ
QYGKASLTASDTELVNGARSRWQNTVGGLQDAMRVQAGVVANIDTNRAQMSALVDQSQGA
TGALQATQAGNQLLALLAQQLADLTAVGAANGRAQALTEAERAAAAEQGREQRRRFLTPG
SGYQPGNAQMFGNRN
NT seq 768 nt   +upstreamnt  +downstreamnt
atgaagacctatcgttccccccggcgcgcgctcatgctcgcggcgaccatgctggcgacg
ccgctcgcggtctcgccaatactctcgactccggctgccgcgcagtgggtggtctatgac
cccaccaactacgcccaaaatgtcctgacggcagcgcgttcgctcgagcagatcaacaat
cagattcgttcgctccagaacgaagcgcagggcctcatcaaccaggcgcgcaatctcacc
agcctgccgtattcgtcgctccagcaactccagcaaaacgtccagcgcacgcagcagctc
ctgcggcaggcacagaacatcgcctacgacgtccagaacatcgaccagatgtttcagcag
caatacgggaaggcctcgctcaccgcgtccgacaccgaactcgtcaatggcgcgcgctca
cgttggcagaatacggtgggtggacttcaggacgccatgcgcgtgcaggcaggcgtggtt
gccaatatcgacaccaaccgcgcgcagatgtcggcgttggtcgatcagagccaaggcgcg
accggcgcgctgcaggcgacgcaagcaggcaaccagcttctcgcgctcctcgcccagcag
ctcgccgatctcaccgcggtcggcgccgccaacggccgcgcccaggcgctcaccgaggcc
gaacgcgccgcagcggcagagcagggccgcgagcagcgtcggcgattcctgacgcctggc
tccggctaccagccgggcaacgcccagatgttcggcaaccgcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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