KEGG   Afipia carboxidovorans OM4: OCA4_c06220
Entry
OCA4_c06220       CDS       T01967                                 
Name
(GenBank) ABC transporter, substrate-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oco00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA4_c06220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:oco02000]
    OCA4_c06220
Transporters [BR:oco02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    OCA4_c06220
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AEI01771
Position
651725..653239
AA seq 504 aa
MSAFHKWMACLGLAAMTLAPLSASAGPDGRVVVAQGVYPVSFDPHRDVTVPTINVNANIY
DALLARDSDLKIVPALAESQNRISDTVLELKLRKNVKFHNGDAFSAKDVKFSLDRVLNKE
ERSPQRGWINTVSSVDVVDDYTVRLTTSVPDPVLPARLTLINIVSKAYFDKVGLEGIAAN
PVGTGAYKVGKWVRGDFLDLDANENYWGGAPTVKKAQFRAIPDVAARIAALQAKNVDIIT
NLPPDYIAAIKKASDLQVATVPSARVLFFGLVNTVPGPLQDQRVRQAINHAVNVDEIVKS
LLLGNGIRAGDVNGHILRLLGVDFKSKLYDYNPKKAKQLLAEAGFPNGFSIDMDTPNGRY
LMDRVISQIVAAQLGEVGIKVNLKVHEWGNYAQMFTTHKVSPMYMLGWALPSMDPDQWAT
PQFGAGEPVSNFDDKEIQALVVEARQEMDPDKRNKLYEKLNNMIHDKAAWLFLHQQIDLY
GVNAKLDWKPRADESLRLADIKLR
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgagtgcttttcataagtggatggcctgtttgggcctcgctgccatgacgctcgcgccg
ctcagcgcttcggccggtccggacggccgcgtcgtcgtggcgcagggcgtctatccggtg
agcttcgatcctcaccgcgacgtcaccgttccgaccatcaacgtcaatgccaacatctat
gatgcgctccttgcgcgcgattccgatctgaagatcgtgcctgcgcttgccgaatcgcag
aatcgtatcagcgatacggtgctcgagctgaagcttcgcaagaacgtgaaatttcacaat
ggcgatgcgttcagcgcgaaggatgtcaagttctcgctcgatcgcgtgctcaacaaggaa
gagcgctcgccgcagcgcggctggatcaacacggtgtcgtccgtcgatgtcgtcgacgat
tacaccgtccggctgacgacgtcggtgccggacccggtgctgcccgcgcgtctcacgctc
atcaacatcgtctcgaaagcttacttcgataaggtcggccttgaaggcattgccgccaac
ccggtgggcaccggtgcttacaaggtcggcaagtgggtgcgtggcgatttccttgatctc
gatgccaacgagaattactggggcggcgcgccgacggtgaagaaggcgcagttccgcgcc
attcctgacgtcgcggcccgcatcgccgcgctgcaggcgaagaacgtcgacatcatcacc
aacctgccgccggactacatcgccgcgataaagaaggcctccgaccttcaggtggcgacc
gtcccgagcgcgcgtgtgctgttcttcggtctggtgaacaccgttcccggaccgctgcag
gaccagcgcgtccgtcaggcgatcaaccacgccgtcaatgtcgatgaaatcgtcaagagc
ctgctgctcggcaacggcattcgtgcgggcgacgtcaacggccatattcttcggctgctc
ggtgtggacttcaagtcgaagctttatgactataacccgaagaaggccaagcaactgctc
gcggaagccggcttcccgaacggcttttccatcgacatggacacgccgaacggccgttac
ctgatggaccgcgtcatctcgcagatcgttgctgcccagctcggcgaggtcggcatcaag
gtcaatctgaaggtccatgagtggggcaactacgcccagatgttcacgacgcataaggtg
tcgccgatgtacatgctgggctgggcgcttcccagcatggaccccgatcagtgggcgacc
ccgcagtttggcgcaggcgagccggtgtcgaatttcgacgacaaggaaatccaggctctt
gttgtcgaagcgcgtcaggaaatggatcccgacaagcgcaacaagctctacgagaagctg
aacaacatgatccacgacaaggcggcctggctgttcctgcatcagcagatcgacctttat
ggcgtgaacgccaagctggattggaagccgcgcgctgacgaaagtctgcggcttgccgac
atcaagcttcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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