KEGG   Afipia carboxidovorans OM4: OCA4_c13000
Entry
OCA4_c13000       CDS       T01967                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:oco00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    OCA4_c13000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:oco02000]
    OCA4_c13000
Transporters [BR:oco02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    OCA4_c13000
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 SBP_bac_1 SBP_bac_11 PBP_like_2
Other DBs
NCBI-ProteinID: AEI02440
Position
1389790..1390881
AA seq 363 aa
MMKIVDTVRHVRKACALVLAVGGALAVLSGVGSSAQAADEKELVFAGFGGSLQKSLQATV
IPAFEKKYGVKVVYVTGTSNQILAKVKAQRNSPQIDVIWANDTTHYQGKAEKLYAKLDPA
KVPNLSQLYDFAKDRDGIGIVMGVQALGIEYNTKVFKEKGWAPPTSWADLWDPKYKGHVV
FYNMPIGYTNLLFAKIADMNGGSVTNLEPAWNKMKELQPNVLAFVDPPAQVDALFGTGSA
WIGFNGSARVHDFAGTGAPVAMVLPKEGGILYPQQFDIVANAPHPDLAQKFIDFTISAEA
QKMIAESLLLGPVNKTVKLDDAAAAKVPYGEKNVTALLNLDIGPINQNLQSLTARWTAMV
GGR
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgatgaagatcgttgatacggtacgtcatgtgcgaaaagcctgtgctctggttcttgcg
gtagggggcgcgctcgcggttctctccggtgtcggcagctccgcgcaggcggcggacgag
aaggagcttgtgttcgcaggcttcggcggctcgctccagaagtcgcttcaggcgacggtc
attccggcattcgagaagaagtacggcgtcaaggtggtctacgtcaccggcacgtcgaac
cagattctcgccaaggtgaaggcgcagcgcaacagcccgcagatcgatgtgatctgggcc
aacgataccacgcattatcaaggcaaggccgagaagctttacgccaagctcgatccggcc
aaggtgccgaacctgtcccagctctatgacttcgcgaaggatcgcgacggcatcggcatt
gtgatgggcgttcaggcgctcggtatcgaatacaataccaaggtgttcaaggagaagggt
tgggcgccgccgacctcatgggcagatctgtgggacccgaaatacaagggccatgtcgtc
ttctacaacatgccgatcggctacacgaaccttctgttcgcgaaaatcgccgacatgaat
ggtggatcggtcaccaatcttgagccggcctggaacaagatgaaggagctgcagccgaat
gtgctcgccttcgtcgatccgccggcgcaggtcgatgcgctgttcggaacgggaagcgca
tggatcggcttcaacggcagcgcgcgcgtgcacgattttgccggcaccggcgcgccggtt
gcgatggtgctgccgaaggagggcggaattctctatccgcagcagttcgacatcgttgcc
aacgcgccgcatccggatctcgcccagaagttcatcgatttcacgatcagcgccgaggcg
cagaagatgatcgcggaaagccttctgcttggtcccgtcaacaagaccgtcaagcttgat
gatgcggcggcggccaaggttccttatggcgagaagaacgtcaccgcgctcctcaatctg
gatatcgggccgatcaaccagaacctgcagagcctgaccgcgcgctggaccgcaatggtg
ggaggccgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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