KEGG   Afipia carboxidovorans OM4: OCA4_c27270
Entry
OCA4_c27270       CDS       T01967                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
oco  Afipia carboxidovorans OM4
Pathway
oco00470  D-Amino acid metabolism
oco00550  Peptidoglycan biosynthesis
oco01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oco00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    OCA4_c27270 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    OCA4_c27270 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:oco01011]
    OCA4_c27270 (murD)
Enzymes [BR:oco01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     OCA4_c27270 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:oco01011]
 Precursor biosynthesis
  Amino acid ligase
   OCA4_c27270 (murD)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C IlvN MurD-like_N 2-Hacid_dh_C AdoHcyase_NAD TrkA_N ADH_zinc_N
Other DBs
NCBI-ProteinID: AEI03845
Position
complement(2907708..2909105)
AA seq 465 aa
MIPITSFAGQTVAVFGLGGSGVASCRALKAGGAEVVAGDDSAERLAQAAREGFITADLRT
VSWENFAALILTPGVPLTHPRPHWTVEMARKAGIEVIGDIELFCRERRLHAPGAPFIAIT
GTNGKSTTTALTAHLMREAGFDAQMGGNIGTAILSLAPPAPQRVYVIEMSSYQIDLTPSL
DPSVGILLNVTEDHIDRHGSIEHYAEVKERLVVGVPRGGTAIVGVDDDFSTKAARAAEDT
GKHVVRVSVQRALDDGVFLDGERIVRGAAGGTAKLVDLNGIGSLRGRHNAQNAACAASAA
LALGVPFDVVQRGLASFPGLAHRMEQVGQKGEVLFVNDSKGTNADAAARALSSFTNIYWI
AGGKPKTGGIESLREFFPRIRKAYLIGEAAQEFSRTLEGVPQEISGTLDEAVPHAARDAA
ASGGHAVVLLSPACASFDQFPNFEVRGDYFRKLVLALGGVAPVKP
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgatccccatcacttcctttgccggtcagacggtggccgtgttcggcctcggcggttcg
ggcgttgcaagctgccgcgcgttgaaagccggcggggcggaagtcgttgccggtgacgat
agtgccgagcgccttgcgcaggccgcgcgggagggtttcatcaccgccgatctgcgtacc
gtgtcgtgggagaatttcgcggcgctcattctgacgcccggcgtgccgctgacgcatccg
aggccgcattggaccgttgagatggcgcgtaaagccggcatcgaagtgatcggcgatatc
gaactgttctgccgcgagcgccgccttcatgcgccgggtgcgccgttcatcgccatcacc
ggcaccaacggcaaatcgaccaccacggcgctcaccgcgcatctgatgcgcgaggcaggc
ttcgacgcgcagatgggcggcaacatcggcaccgcgatcctgtcgctggcgccgcccgcg
ccgcagcgcgtctatgtgatcgagatgtcgtcgtatcagatcgaccttacgccctcgctc
gatccgagcgtgggcatcctgctcaacgtcaccgaagatcatatcgatcgccacggcagc
atcgagcattacgccgaggtgaaggagcgccttgtcgtcggcgtgccgcgcggcggcacc
gcgatcgtcggcgtcgatgacgatttcagcaccaaggcggcgcgggcggcggaagacacc
ggcaagcatgtcgtgcgtgtctctgtacagcgtgcgctggatgacggcgtgtttctcgat
ggcgagcggatcgtacgcggcgcggcgggcggcacggccaagctcgtcgatctgaatggc
atcggttcactgcgcggccgtcacaatgcgcagaacgcggcgtgtgcggcgagtgccgcg
ctcgcgctcggtgtgccgttcgacgtggtgcagcggggccttgcgagctttcccggcctc
gcgcatcgcatggagcaggtggggcagaagggcgaggtgctgttcgtcaacgattccaag
ggcaccaacgctgatgctgcggcgcgggcgctgtcgtcgttcactaatatttactggatc
gcgggcggcaagccgaagaccggcggcatcgaatccctgcgtgagttctttccacgtatt
cgcaaggcctatctgatcggcgaagcagcgcaggagttttccaggacgctcgaaggcgtg
ccgcaggaaatctccggtacgctggatgaggcggtgccgcatgccgcgcgcgatgcggcc
gcaagcggtggccatgccgtggtgctgctgtcgcccgcctgtgcctcgttcgaccagttt
ccgaacttcgaggtgcggggcgactatttccggaagctcgtgctggcgctcggcggcgtc
gcgccggtgaagccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system