KEGG   Octadecabacter sp. SW4: FTO60_14235
Entry
FTO60_14235       CDS       T06209                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
oct  Octadecabacter sp. SW4
Pathway
oct00300  Lysine biosynthesis
oct00470  D-Amino acid metabolism
oct01100  Metabolic pathways
oct01110  Biosynthesis of secondary metabolites
oct01120  Microbial metabolism in diverse environments
oct01230  Biosynthesis of amino acids
Module
oct_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:oct00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FTO60_14235 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FTO60_14235 (lysA)
Enzymes [BR:oct01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     FTO60_14235 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QEE36778
UniProt: A0A5B9ETW4
Position
complement(2873937..2875211)
AA seq 424 aa
MDHFLYRDGALFAEDVPVAEIAAAVGTPFYVYSTATLQRHFRLFDEALSFADHLVCFAMK
SLSNQAILTLLAREGAGMDVVSGGEYARAIAAGVPSDRIVFSGVGKTRDEMRMALQGGIR
QFNVESEPEMLVLNGVALELGVVAPITVRVNPDVDAKTHAKISTGKKEDKFGIPITRARE
VYAMAATLEGLKVIGIDVHIGSQLTQLEPFEAAYRKVADLAAQLRADGHEITRLDLGGGL
GIPYERSNSAPPLPVEYGRLIERTVGHLGCEIEIEPGRLISGNSGIMVSKVIYVKSGEDR
DFLILDGAMNDLIRPAMYDAWHDIVPVVEPAAGVEQHRYDIVGPICESGDTFAKSRDMPP
LAADDLVAFRSAGAYGAVMSSEYNSRPLIPEVLVNGDQFAVIRPRPTFEDMINRDNIPEW
LGSS
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggatcattttctttatcgtgacggtgcgctgttcgccgaggatgtgccggtggccgag
attgccgccgcagtgggcacgcccttctatgtctattccacagcgaccctgcagcggcat
tttcgcctgttcgacgaggccttgagctttgccgatcatttggtctgctttgcgatgaaa
agcctgtcaaatcaggccattctgacgcttttggcgcgcgaaggtgcgggaatggacgtt
gtgtcgggtggcgaatacgcccgcgcgattgcggcgggtgttccgagcgacagaatagtg
ttttcgggcgtcggcaagacccgtgatgaaatgcgcatggctttgcagggcgggattcgc
cagttcaacgtcgaaagcgaaccggaaatgctggtgttgaacggggtcgcgctggaactt
ggtgttgttgccccgatcaccgtgcgcgtcaacccggacgtcgacgccaagacccatgcc
aagatttcgaccggcaagaaggaagacaaattcggtatcccgatcacccgtgcgcgcgaa
gtttacgcgatggctgcgaccctcgaagggctcaaggtgatcggcattgatgtgcacatc
ggttcgcaactgacgcagttggaaccgttcgaggcggcctatcgcaaagtcgccgatctg
gcggcgcaactgcgcgccgacgggcacgagatcacccgccttgatctgggtggcggcctt
ggtattccttacgagcgatcaaattccgcaccacccctgccagtcgaatacgggcggttg
atcgagcgcaccgtcggccatctgggctgcgagatcgagattgagccgggccgcctgatt
tctggcaattcgggcatcatggtcagcaaggtgatctatgtgaaatcgggcgaggaccgc
gatttcctgatccttgatggcgcaatgaatgatctgatccgccccgcgatgtatgatgca
tggcatgatatcgtgcccgttgtcgaacctgccgcaggcgtggagcagcaccgctatgat
attgtcggtccgatctgcgaaagtggcgacacctttgcaaaatcacgggacatgccgcca
ctggctgcggatgatctggtggcgttccggtcggccggcgcttacggcgcggtgatgtcg
agcgaatataattcccgcccgctgatccccgaagtcctggtcaatggggatcaatttgcg
gttatccgcccacgccctacctttgaagatatgattaatcgcgataacatccctgaatgg
ttagggtcatcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system