KEGG   Oryctolagus cuniculus (rabbit): 100339655
Entry
100339655         CDS       T03373                                 
Name
(RefSeq) tRNA dimethylallyltransferase isoform X2
  KO
K00791  tRNA dimethylallyltransferase [EC:2.5.1.75]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ocu01006]
    100339655
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocu03016]
    100339655
Enzymes [BR:ocu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.75  tRNA dimethylallyltransferase
     100339655
Prenyltransferases [BR:ocu01006]
 Compound prenylation
  tRNA dimethylallyltransferase
   100339655
Transfer RNA biogenesis [BR:ocu03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    100339655
 Prokaryotic type
    100339655
SSDB
Motif
Pfam: IPPT IPT AAA_33 zf-C2H2_jaz AAA_28 AAA_18 AAA_16 AAA_22 AAA_25 nSTAND3 AAA Hpr_kinase_C KTI12 Cytidylate_kin PRK RNA_helicase ABC_tran AAA_14 AAA_23 AAA_5 DUF87
Other DBs
NCBI-GeneID: 100339655
NCBI-ProteinID: XP_002715774
Ensembl: ENSOCUG00000002054
UniProt: G1SGQ1
Position
13:126710560..126761815
AA seq 467 aa
MAAVAAARAVPVGSGFRGLRRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVY
EGLDIITNKVSAQEQRICQHHMISFVDPLVTNYTVVDFRNKATSLIEDIFSRDKIPIVVG
GTNYYIESLLWKVLVSTKPQEMGSENTTDRKVELEKEDGHELHRRLSQVDPEMAAKLHPH
DKRKVARSLQVFEETGISHSEFLHRQHAEEGGGPLGGPLKFPNPCILWLHADQTVLDERL
DKRVDDMLAAGLLEELRDFHRRYNQKNVSEDSQDYQHGIFQSIGFKEFHEYLITEGKCTP
ETSNQLLKKGIEALKQVTKRYARKQNRWIKNRFLSRPGPSVPPVYGLEVSDVSKWEESVL
EPALEIVQSFIQGHKPAATPIKMPYDENENKRSYHMCDCCDRIIIGDREWAAHIKSKSHL
HQLKKKRRLESNAVNTRESQSISPDCDRELKEKGCPGQNDAELICST
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggcggcggtggcggctgctcgagcggttcctgtgggctcgggattccggggtctgcga
cggactttacctctggtagtgattctcggggccaccggcactggcaaatccaccctggca
ttgcagctaggccagcggctcgggggcgagatcgtcagcgcagactccatgcaggtctat
gaaggtttagacatcatcaccaacaaggtttctgcccaagaacagaggatctgccagcat
cacatgatcagctttgtggatcctcttgtgaccaattacacagtggtagacttcaggaac
aaagcaacgtctctgattgaagatatattttcccgagacaaaattcctattgtcgtggga
ggaaccaattattatattgagtctctgctctggaaagttctcgttagtaccaagccccag
gagatgggcagtgagaacacaactgaccggaaagtagagcttgaaaaggaggatggccat
gaactccacaggcgcctaagccaggttgacccagaaatggctgccaagctgcacccacat
gacaagcgcaaagtggccaggagcttgcaagtgtttgaagaaaccggaatatctcacagt
gaatttcttcatcgtcaacatgcagaagaaggtggtggtccccttggaggcccactgaag
tttcctaacccttgcatcctctggcttcatgctgaccagacagttctagatgagcgcttg
gataagagggtggacgacatgcttgctgctggactgttggaggaactaagagattttcac
agacgctataatcagaagaatgtttcagaagatagccaggactatcaacatggtatcttc
cagtcaattggcttcaaggagtttcacgagtacctgatcactgagggaaaatgcacacca
gagactagtaaccagcttctaaagaaaggtattgaggctctgaaacaagtaactaagaga
tatgctcggaagcaaaaccgatggattaaaaaccgctttttgagcagacctggtcctagt
gtcccaccagtgtatggcttagaggtatctgacgtctccaagtgggaagagtctgttctg
gaacctgctcttgaaatagtgcaaagtttcatccagggccacaagcctgcagccactcca
ataaagatgccctacgatgaaaatgagaacaagaggagctatcatatgtgtgactgctgt
gatcgcattatcattggggaccgcgaatgggcagctcatataaaatccaaatcccacttg
catcaactgaagaaaaaaagaaggttggaatcaaatgctgtcaacaccagagaaagtcag
agtatctcccctgattgtgacagagaacttaaagagaaggggtgcccagggcagaatgat
gcagagctgatatgcagcacataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (21)   
   Pfam (21)   
All databases (56)   

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