KEGG   Oryctolagus cuniculus (rabbit): 100339839
Entry
100339839         CDS       T03373                                 
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04810  Regulation of actin cytoskeleton
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100339839
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100339839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100339839
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100339839
   Factors involved in mRNA localization
    Other mRNA localization factors
     100339839
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd zf-CW LRIF1
Other DBs
NCBI-GeneID: 100339839
NCBI-ProteinID: XP_051678173
Ensembl: ENSOCUG00000010732
Position
17:78386196..78485471
AA seq 1253 aa
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGS
LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSL
ELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSS
IYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVP
LKKMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQSLASS
NT seq 3762 nt   +upstreamnt  +downstreamnt
atggcggcccaggtgacgctggaggatgcgctgtccaatgtggacctcctggaggagctg
cctctgcccgaccagcagccctgcatcgagcccccgccatcctcactgctctaccagccg
aatttcaacactaactttgaagacaggaatgcctttgtcaccggcatcgcaagatacatt
gaacaagccactgtccactctagcatgaatgagatgctggaggaaggccaagagtacgcc
gtcatgctgtacacctggagaagctgctcccgggccatcccccaggtgaaatgtaatgag
cagcctaacagagtggaaatctatgagaaaaccgtggaggtcctggagcctgaggtcacg
aaactgatgaatttcatgtacttccagagaaacgccatcgagcgtttctgcggggaggtg
cggcgcctgtgccacgccgagaggaggaaggacttcgtgtccgaagcctacctgatcacg
ctgggcaagttcatcaacatgttcgccgtgctggacgagctgaagaacatgaagtgcagc
gtgaagaacgaccactcggcctacaagagggctgctcagtttttacgtaaaatggcagat
ccacagtccatccaggagtctcagaatctgtccatgttcctggcaaaccacaacaagatc
acgcaatctctgcagcagcagctcgaagtcatttctggctacgaagagctcttggcagac
atcgtgaatctgtgcgtggattactacgagaacaggatgtacttgacgcccagcgagaaa
cacatgcttctcaaagtcatgggatttggtctgtacttgatggatggaagtgtcagtaac
atctataaactagatgccaagaaaagaattaacttgtccaaaattgacaagtacttcaag
cagctccaggtggttccgctgttcggggatatgcagatagaactggcaagatacatcaag
accagcgcccactatgaggagaacaaatcccggtggacctgcacgtcttccagcagcagc
ccgcagtacaacatctgcgagcagatgatccagatccgcgaggaccacatgcgcttcatc
tcggagctggcgcgctacagcaacagcgaggtagtcacagggtcaggccgtcaggaggcc
cagaagacagacgccgagtaccggaagctcttcgacctggctctgcaaggcctgcagctg
ctgtcgcagtggagtgcacacgtgatggaagtgtactcgtggaaacttgtgcacccaacc
gacaagtactccaacaaggactgtccagacaacgctgaggagtatgagcgtgccacgcgc
tacaactacaccagcgaggaaaagtttgccctggtggaggtgatcgccatgatcaagggc
ctgcaggtgctgatgggcaggatggagagcgtgttcaaccatgccatccggcacacagtc
tacgcagcgctgcaggacttctcccaggtgacactgcgggagccgctgcggcaggccatc
aagaagaagaagaatgtcatccagagtgtcctgcaggccatcaggaagacggtgtgtgac
tgggagacagggcatgagcccttcaacgacccggctctgcggggcgagaaggaccccaag
agtggctttgacatcaaagtgccacggcgcgccgtgggaccctccagcacgcagctttac
atggtgagaaccatgctagagtccctcattgcagacaaaagtggttccaagaaaaccctg
agaagtagccttgaggggcccaccatattggacatagaaaaatttcatcgcgagtccttc
ttctacactcacttgataaatttcagtgaaacactgcagcagtgctgtgacctctcacag
ctgtggttccgagagttcttcctggagctgaccatgggcaggaggatccagttccccatt
gagatgtccatgccttggatcctcaccgaccacatcctggagaccaaggaggcgtccatg
atggagtacgtcctctactccctggacctgtacaacgacagtgcccactacgcgctcacc
aggttcaacaagcagtttctctacgacgaaatcgaggcagaggtgaatctatgttttgac
caatttgtttacaagctggctgaccagatatttgcatattataaggttatggcaggaagt
ttacttctcgataaacgattacgatcggaatgcaagaaccagggtgccacgatccacctc
ccgccatccaaccgctatgagacactgctgaaacagaggcatgtgcagctcctgggccgg
tccatagacctcaatcgtctgattactcagcgagtctcagcagccatgtataagtctctg
gagctggcaattgggcgatttgaaagtgaagacttaacatcaatagttgagttggatggc
ctcttggaaatcaaccgcatgacccacaagctgctgagcaggtacctgacactggacagt
tttgacgctatgttccgggaggccaaccacaacgtgtctgctccctatgggagaatcacc
ctccacgtcttctgggaactcaactacgacttcctgcccaactactgctacaacggctcc
accaaccggtttgttcggacagtattaccattttctcaggagtttcaaagagacaaacag
ccaaatgcacaaccccagtatttgcatgggtccaaggctttgaacctggcctactccagc
atttatggcagctacaggaacttcgtggggcctccacactttcaggtcatctgccggctg
ctcggctaccaaggcatcgctgtggtcatggaggagctgctgaaggttgtcaagagcctg
cttcaaggcacgatcctgcagtacgtgaagacactgatggaggtgatgcccaagatctgc
cgcctgccccggcatgaatacggctctcctggcatcctggagtttttccaccaccagctg
aaggacattgtggagtacgcagaactgaagactgtgtgcttccagaatctgcgggaggtg
ggcaatgctgtcctcttctgcctgctcattgaacagagcctgtctttagaagaagtatgt
gacctgttacatgcagcccctttccagaacatcttaccacgtgtccatgtgaaagagggg
gagagacttgatgccaagatgaaaagactggaatccaagtatgccccactgcatcttgtc
ccactgattgaaaggctagggactcctcagcaaattgcaatcgcaagagagggtgacctg
ctgaccaaggaacggctctgctgcggcctgtctatgtttgaggtcatcctgacacggatt
cgaacctttctagatgaccctatctggcgtgggcctttgcctagcaatggagtcatgcac
gtggatgagtgtgtggagtttcacaggctgtggagtgccatgcagtttgtctactgcatt
ccagtggggacgcatgagtttactgttgagcagtgttttggtgatggactccactgggct
ggttgtatgatcattgtacttctcgggcaacagcggcgctttgctgtgctggatttttgc
tatcatctacttaaagtccagaaacatgatggcaaagatgagatcatcaaaaacgtgcct
ttgaagaagatggtggaaagaattcgcaagttccagattcttaatgatgagatcatcact
atcctggacaagtacttgaagtctggtgatggagagagcacgcccgtggagcatgtgcgc
tgcttccagccgcccatccaccagtctctagccagcagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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