KEGG   Oryctolagus cuniculus (rabbit): 100342776
Entry
100342776         CDS       T03373                                 
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100342776
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100342776
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     100342776
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 100342776
NCBI-ProteinID: XP_002709711
Ensembl: ENSOCUG00000006121
UniProt: U3KNX3
Position
2:complement(117902256..118036331)
AA seq 509 aa
MSGGFELQPRDGGPRVALAPGETVIGRGPLLGITDKRVSRRHAILEVVGGQLRIKPIHTN
PCFYQSSKRSQLLPMKTNLWRWLNPGDTFSLLVDKYIFRVFSTRSETEMECTLRNSQMLE
EDNTPNEIPKSPMINLPDKTPSTSQLEKSAENIKGQTTSTASASFVGDCRDVSNQQPNLT
QRKRILPAWMLAEDLSDQNLSSPGISGDNNVIQGSGKDGICENKTQVNISQQGRKRSISS
GNSESTLAEQNTGKKYKNADQEESAISSKERPQIFSAVTLSSTEMNNMKTIAQRDETPIE
ELGEVSEHKLTTKETADKEDQAIGGSESYPAQDKSFPVESAGPHPESGSAPTSPETLHAK
AADSVPEGSDENKVKRTSCMYGANCYRKNPVHFQHFSHPGDSDYGDAQVTGQEETDDRPE
CPYGASCYRKNPQHKIEYRHDTLPVRNAADEDNEQPEECDLNDSFQEEEEEECDPTDEDP
DWEPGREDEEKEDVEELLREAKKFLRRKK
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtccgggggcttcgagctgcagccgcgggacggcggcccccgggtggccctggcgccc
ggggagacggtgatcggccgcgggccactgctgggaataacagacaagagagtctcccga
agacatgccattcttgaggtggtaggcggtcagcttcgcatcaaaccgatacacacaaat
ccatgtttttatcagtcttctaagaggagccagctcttaccaatgaagacaaatctgtgg
cgctggttgaatcctggagatactttttctctgttagttgacaaatatattttccgtgtt
ttttctacacgctctgaaacagaaatggaatgtaccttgagaaacagtcaaatgcttgaa
gaagataatacaccaaatgaaataccaaaatctcccatgattaatttgcctgataagaca
cctagtacctcacaactggaaaaaagcgcagaaaatatcaagggccagaccacttccaca
gcaagtgcgtcttttgtaggtgactgtagagatgtcagtaatcaacagccaaaccttaca
cagaggaaaagaatccttccagcttggatgttagcagaagatttaagtgatcaaaacctt
tcatcacctggaatcagtggagataacaatgtaatccagggaagtggaaaagatggaatc
tgtgaaaataaaacccaagtaaatatatcacagcaaggaagaaaacgatcgatttcatca
ggaaattcagaaagtacattagcagaacaaaacacaggaaaaaagtacaaaaatgctgat
caagaagaatctgccatttcatccaaggaaagaccacaaatattttctgcagtcacatta
agtagcacagagatgaataacatgaagactattgcacagagagacgaaactccaatagaa
gagcttggtgaggtttctgaacataaactcaccactaaagaaacagcagataaagaagac
caggcaataggtggttctgaaagctatccagctcaagacaaatcattccctgttgagtct
gcaggacctcatcctgaatctggctcggctcccaccagtcctgaaactttgcatgcaaag
gctgctgactcagttccagaaggttctgatgaaaacaaagtcaagaggacatcctgcatg
tatggggcaaactgctacaggaagaatcctgttcattttcaacacttcagccaccctggt
gatagtgattatggagatgcacaagttacgggccaagaggagactgatgaccggccggag
tgtccctatggagcatcttgttacaggaagaatccccagcacaagatagagtacagacat
gacacactcccagtgagaaatgctgcagatgaagataatgagcaacctgaagaatgtgac
ctcaatgacagctttcaagaggaagaggaagaagaatgtgatccaacagatgaagatcct
gattgggaaccaggaagggaagatgaggagaaggaagatgtggaagagcttttgagagaa
gctaaaaaatttttgaggagaaagaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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