KEGG   Oryctolagus cuniculus (rabbit): 100343083
Entry
100343083         CDS       T03373                                 
Name
(RefSeq) lysine-specific demethylase 6B isoform X1
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocu03036]
    100343083
Enzymes [BR:ocu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     100343083
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100343083
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 100343083
NCBI-ProteinID: XP_051681180
Ensembl: ENSOCUG00000017292
Position
19:complement(8966459..8987455)
AA seq 1663 aa
MHRAVDPPGARAAREAFALGGLSCAGAWSSCPPHPPPRSAWLPGGRCSASIGQPPLPAPL
PPSHGSSSGHPNKPYYAPGTPTPRPLHGKLESLHGCVQALLREPAQPGLWEQLGQLYESE
HDSEEAICCYHSALRYGGSFAELGPRIGRLQQAQLWNFHAGSCQHRAKVLPPLEQVWNLL
HLEHKRNYGAKRGGPPVKRAAEPPVVQPVPPAALSGPPGEESLSPGGKRRRGCSSEQTGL
PPGLPLPPPPLPPPPPPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPPE
RQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPPGAESHGCLPATRPPGSDLR
ESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTATTSSSSSSSSSMGLRGVEPSPGI
PGADHYQTPALEASSHQARLGPSAHGSRKPFLAAPPATPHLPLTHGPPSPPPPPCPRLLR
PPPPPAWLKGPACRAAREDGEFLEELFFGAEGPPRPPPPSLPHREGFLGPPTPRFSVGTQ
DSHTPPTPPTTSSSSSNSGSHSSSPTGPVSFPPPPYLARSMDPLPRPPSPTLSPQDPPLA
PLTLALPPAPPSSCHQNTSGSFRRSESPRPRVSFPKTPEVGPGPSPGPLSKAPQPVPPGV
GELPARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMKMLDESIRKEEEQQQQEAGVV
PPPPLKEPFVSLQPPFPTDTAPSTTAAAAPTTTATTTTPTATATATTVTQEEEKKPPPAL
PPPPPLAKFPPPQPQPPPAPPAPAPAPAASPASLLKSLACVLEGQKHCYRGTGAAVATRP
GPLPTTQYSPGPPSGATAPPPASAAPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEPA
PGPTTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGRSATGPADPGETADPVDSGT
ERLLPSAQTKEESGGAAGATAAVVAAGGPGSGKRRQKEHQKEHRRHRRACKDSVGRRPRE
GRAKAKAKAPKEKSRRVLGNLDLQSEEIQGREKARPELGGASKAKPPTAPAPPPAPAPSA
QPPAPSAPVAGKKAREETPGPPGVSRADMLKLRSLSEGPPKELKIRLIKVESGDKETFIA
SEVEERRLRMADLTISHCAADVLRASKNAKVKGKFRESYLSPAQSVKPKINTEEKLPREK
LNPPTPSIYLESKRDAFSPVLLQFCTDPRNPITVIRGLAGSLRLNLGLFSTKTLVEASGE
HAVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEKESED
EESEEPDSTTGTPPSSAPDPKNHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTG
NMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWET
ISAFCDRHGVDYLTGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNN
IAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCL
LQSMKHCQVQRESLVRAGKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLV
HCEGCARWRSAGLQGVVVLEQYRTEELAQAYDAFTLAPAGTSR
NT seq 4992 nt   +upstreamnt  +downstreamnt
atgcatcgggcagtggaccctccaggggcccgcgctgctcgcgaagcctttgcccttggg
ggcctgagctgtgctggggcctggagctcctgcccgccccatccccctcctcggagcgca
tggctgcctggaggcagatgctcggccagcattgggcagcccccgctccctgctccccta
cccccttcacacggcagtagctctgggcaccccaacaaaccatattatgctccagggaca
cctaccccacgacccctccatgggaagctggaatccctgcatggctgcgtgcaggccttg
ctccgggagcccgcccagccggggctgtgggagcagcttgggcagctgtacgagtcggag
catgacagtgaggaggccatatgctgctaccacagcgcccttcggtacggaggaagcttt
gcggagctgggcccccgaatcggccgcctgcagcaggcccagctctggaacttccatgct
ggctcctgccagcaccgagccaaggtcctgcccccgctggagcaagtatggaacttgctg
caccttgagcacaaacggaactatggggccaagcggggggggccgccggtgaagcgagct
gccgaacccccagtggtgcagcctgtgcctcccgcagcgctctcaggccccccgggggag
gagagcctcagtcctgggggcaagcgaagaagaggctgcagttctgagcagactggcctc
cccccagggctgccactgcctccgccaccattaccaccaccaccaccaccaccaccacca
ccaccaccactgcctggcctggctaccagccccccatttcagctgaccaagccaggtttg
tggagtaccctgcatggagatgcttggggccccgagcgcaagggttcagcacccccagag
cgccaggagcagcgccactcgctgcctcacccatatccatacccagctccggcctacacc
gcgcacccccctggccaccggctagtcccagctgcacccccaggcccgggcccccgcccc
ccaggagcagagagccatggctgcctgcctgccacccgtccccccggaagtgaccttaga
gagagcagagttcagaggtcgcggatggactccagcgtttcaccagcagcaaccaccgcc
tgcgtgccttacgccccctcccggccccctggcctccccggcaccaccgccaccaccagc
agcagtagcagcagcagcagcagcatgggtctccggggcgtggagccgagcccaggcatc
cccggcgctgaccattaccaaacgcccgcgctggaggcctcctctcaccaggcccgcctg
gggccctcggcacacggcagtcggaaaccgttcttggcggctccccctgccactccccac
ctgcccctgacacatggacccccgtcaccccctccgcccccctgtccccgcctcctgcgc
cccccaccaccccctgcctggctgaagggcccggcttgccgggcagctcgagaggatgga
gagttcttagaggagctcttctttggggctgagggaccaccccgccctcctcccccatcc
ctcccgcaccgtgagggcttcttggggcctccaaccccccgtttttccgtgggcactcag
gattcgcacacccctcccactcccccaaccaccagcagtagcagcagcaacagtggcagc
cacagcagcagccctactgggcctgtgtcctttcccccacctccctatctagccagaagt
atggacccccttccccggccgcccagccccacactgagcccccaggacccacctcttgca
cctctgactcttgccctgcctccagcccctccctcctcctgccaccaaaatacctcagga
agcttcaggcgctcggagagcccccggcccagggtctccttcccaaagacccccgaggtg
gggccggggccatccccgggccccctgagtaaagccccccagcctgtgccgcccggggtt
ggggagctgcctgcccgaggcccacgacttttcgatttcccccctaccccgctggaggac
cagtttgaggagccagctgagttcaagatcctacctgacgggctggccaacatcatgaag
atgctggacgagtccatccgcaaggaggaggagcagcaacagcaggaggcaggcgtggtc
cccccgcccccgctgaaggagccctttgtatctctgcagcccccgttccccaccgacaca
gcccccagcaccactgctgccgccgcccccaccaccacagccacaaccaccacgcccacc
gccaccgccaccgccaccacggtcacccaggaagaggagaagaagccaccgccagccctg
ccaccaccgccgcctctagccaagttccctccgccccagccccagccgcccccggccccc
ccagccccagccccagccccagccgccagcccagccagcctgctcaaatccttggcctgc
gtgctggagggacagaagcactgttaccggggcactggagcagctgttgccacccggccc
gggcccttacccaccactcagtattcccccggtcccccttcaggtgctaccgcgccgccg
cccgcctcggcggcccccagcgcccagggctccccacagccctccgcttcctcgtcatct
cagttctctacctcaggcgggccctgggcccgggagcgcagggcgggcgaagagccagcc
ccgggccccacgacccccacccagccacccccacccctgtcactgccccctgctcgctcc
gagtctgaggtgctagaagagatcagccgggcttgtgagaccctcgtggagcgcgtgggc
cgcagcgccaccggcccagcagacccaggggagacagcagacccagtggacagtgggact
gagcggctgctgccttctgcacagaccaaggaggagagtggcggggctgccggggccaca
gcagcggtggtggcggcgggagggccaggcagcggcaagcggcggcagaaggagcaccag
aaagagcatcggcggcacaggcgggcctgcaaggacagtgtgggccggcggccccgcgaa
ggcagggctaaggccaaggccaaagcccccaaagaaaagagccgccgggtgctggggaac
ctagacctgcagagcgaggagatccaggggcgtgagaaggcgcggcccgagcttggtggg
gcctccaaggccaaaccacctacggctccagcccctccaccagctcctgcaccctctgcc
cagcccccagccccatcagcccctgtcgctgggaagaaggcccgggaggaaactccaggg
ccaccgggtgtcagccgggccgacatgctgaagctgcgctccctcagcgaggggcccccc
aaggagctgaagatccggctcatcaaggtggagagcggggacaaggagaccttcatcgcc
tccgaggtggaagagcggcggctgcggatggcggacctcaccatcagccactgcgccgct
gacgtcctgcgtgccagcaagaatgccaaggtgaaaggaaagttcagagagtcctacctt
tcccccgcccagtctgtgaaacccaagatcaacactgaggagaagctgccccgggagaag
ctcaacccccccacacccagcatctatctggagagcaaacgggacgccttctcgccggtg
ctgctgcagttctgtacggacccccgcaatcccatcaccgtgatccggggcctggcgggc
tccctgcggctcaacctgggcctcttctccaccaagacgctggtggaggcgagcggcgag
cacgcggtggaggtgcgcacccaggtgcagcagccgtcggacgagaactgggatctgacc
ggcacccggcagatctggccctgcgagagctcccgctcccacaccaccatcgccaagtat
gcacagtaccaggcctcctccttccaggagtcgctgcaggaagagaaggagagtgaggac
gaggagtcggaggagcccgacagcaccacaggaacccctccgagtagcgcccccgatccc
aagaaccatcatatcatcaaatttggcaccaacatcgatctgtcggatgccaagcggtgg
aagccccagctgcaggagctgctgaagctgcccgccttcatgcgggtaacatccacgggc
aacatgctgagccacgtgggccacaccatcctgggcatgaacaccgtgcagctgtacatg
aaggtccccggcagccggacgccaggtcaccaggagaacaacaacttctgctccgtcaac
atcaacatcggccccggcgactgtgagtggttcgcggtgcacgagcactactgggagacc
atcagcgccttctgcgaccggcacggcgtggactacttgacaggttcctggtggccaatt
ctggatgacctctacgcgtccaatatccccgtgtaccgcttcgtgcagcgccctggggac
ctcgtgtggattaacgcggggactgtgcactgggtgcaggccacgggctggtgcaacaac
attgcctggaacgtggggcccctcaccgcctatcagtaccagctggccctggaacgatac
gagtggaatgaggtgaagaacgtcaagtccatcgtgcccatgatccacgtgtcctggaat
gtggcgcgcactgtcaaaatcagcgaccccgacctgttcaagatgatcaagttctgcctc
ctgcagtccatgaagcactgtcaggtgcagcgggagagcctggtgcgggccgggaagaaa
atcgcgtaccagggccgggtcaaggacgagcccgcctactactgcaacgagtgcgacgtg
gaggtgttcaacatcctgttcgtgacgagtgagaacggcagtcgcaacacgtacctggtg
cactgcgagggctgcgcgcggtggcgcagcgcgggcctgcagggcgtggtggtgctggag
caataccgcaccgaggagctggcgcaggcctacgacgccttcacgctggcccccgccggc
acgtcgcgatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (103)   
   KEGG ORTHOLOGY (1)   
   RefGene (98)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (17)   
   RefSeq(pep) (17)   
DNA sequence (23)   
   RefSeq(nuc) (17)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (151)   

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