KEGG   Oryctolagus cuniculus (rabbit): 100344339
Entry
100344339         CDS       T03373                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100344339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100344339
   03036 Chromosome and associated proteins [BR:ocu03036]
    100344339
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     100344339
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    100344339
   RSF complex
    100344339
   WICH complex
    100344339
   B-WICH complex
    100344339
   NORC complex
    100344339
   BRF complex
    100344339
   NuRF complex (fruit fly)
    100344339
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 Myb_DNA-binding DBINO AAA_14
Other DBs
NCBI-GeneID: 100344339
NCBI-ProteinID: XP_002716976
Ensembl: ENSOCUG00000013042
UniProt: G1T4M2
Position
15:complement(17834135..17877502)
AA seq 1051 aa
MSAAEPPPPPPPESAPSKPAASAASSGSNSGNKGGPEGVAAQAAASAASAGSADADMEEV
FDEASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMK
PGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLR
DYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTL
HNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFN
WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNS
ADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQR
EWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTN
SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDS
INAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT
VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHV
FASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYRE
KQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRL
FELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQG
FTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIM
AQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHK
LGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKA
EKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq 3156 nt   +upstreamnt  +downstreamnt
atgtcggcggccgagcctccgccacccccgcctcctgagagcgcgccttccaagcccgca
gcctccgccgccagcagcgggagcaacagcggcaacaaaggcggccccgagggcgtcgcg
gcgcaggcggcggcgtctgcggccagcgcgggctccgcggacgccgacatggaggaagtg
tttgatgaggcgtcacctggaaagcaaaaagaaatccaagaaccagatcctacctatgaa
gaaaaaatgcaaaccgacagagcaaatagatttgagtatttattaaagcagacagagctg
tttgcacatttcattcagcctgctgctcagaagactccaacctcacctttgaagatgaaa
ccaggacgtccaagaataaaaaaggatgagaaacagaacttactgtcagttggcgactac
cgacaccgcagaacagagcaagaggaagatgaagaactgttaacagaaagctccaaagcc
accaatgtttgcactcgatttgaagattctccatcatatgtaaaatggggtaaactgaga
gattatcaggtccgaggattaaattggctcatctctttgtatgagaatggcatcaatggt
atccttgcagatgaaatgggcctgggaaagactcttcaaacaatttctctccttgggtac
atgaaacactatagaaacattcctggtcctcatatggttttggtacctaagtctacactg
cacaactggatgagtgaattcaagagatgggtaccaacacttaggtctgtttgtttaata
ggtgataaagaacaaagagctgcttttgtcagagacgttttattaccaggagaatgggat
gtatgtgtaacatcttatgaaatgcttatcaaagaaaagtctgttttcaaaaaatttaac
tggagatacttagttatagatgaagctcacaggatcaaaaatgaaaaatctaagttgtca
gaaatagtgagggaattcaagactacaaatcgattgttattaactggaacaccacttcag
aacaacctgcatgagctttggtcacttcttaattttttattgccagatgtgtttaattca
gctgatgactttgattcctggtttgatacaaacaactgccttggggatcaaaaactagtt
gagaggctgcatatggttttgcgtccatttctcctccgtcgaattaaggctgatgttgaa
aaaagtttgcctccgaagaaggaagtaaaaatctatgtgggtcttagtaaaatgcaaagg
gaatggtatactcggatattaatgaaggatatagatatcctaaattcagcagggaagatg
gacaaaatgaggttattgaacatcctgatgcagttaaggaaatgctgtaatcatccgtat
ctctttgatggagctgagcctggtccgccttacacaacagatatgcatctagttaccaac
agtggcaaaatggttgtattagacaaactgctccctaaattaaaagaacaaggttcacga
gtgctaatcttcagtcaaatgacaagagtattggatattttggaagattactgcatgtgg
agaaattacgagtactgcaggttggatgggcagacaccccatgatgagagacaagattct
attaatgcatacaatgaaccaaacagcacaaaatttgttttcatgttaagcacacgtgct
ggtggccttggcatcaatcttgctactgctgatgtagtaattttgtatgattcagattgg
aatccccaagtagatcttcaggctatggatcgagcccatagaattggacaaactaagact
gtcagagtgttccgcttcataactgacaacaccgtggaagaaagaatagtagaacgagct
gagatgaaactcagactggactcaatagtcattcaacaagggagacttgtggatcagaat
ctgaacaaaatcgggaaagatgaaatgcttcaaatgattcgacatggggcaacacatgtg
tttgcttcaaaggaaagtgagattacagatgaggatattgatggtattttggaaagaggt
gcaaagaagactgcagagatgaatgagaaactttccaagatgggtgaaagctcacttaga
aattttacaatggatacagaatcgagtgtgtataactttgaaggagaagattatagagaa
aagcaaaagatcgcattcacagagtggattgaaccaccgaaacgagaaagaaaagccaac
tatgctgttgatgcatatttcagggaagctcttcgtgttagtgaacctaaagcgcccaag
gctcctcgacctccaaaacagcccaatgttcaggatttccagttttttcccccacgtttg
tttgagttactagaaaaagaaattctgtattacagaaaaactattgggtacaaggtacct
cgaagtcctgacttaccaaatgcagcacaggcacagaaagaagaacagcttaaaattgat
gaagctgaaccccttaatgatgaagagttagaggaaaaagagaagcttttaacgcaggga
tttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaaatggggt
cgtgatgatattgaaaatatagcaagagaagtagaaggaaaaactccagaagaagtcatt
gagtactcagctgtgttctgggaaagatgtaatgaactccaggacatagagaaaattatg
gctcagattgaaaggggagaggcaagaattcaaagaagaataagtatcaaaaaggcactt
gacacaaagattggacggtacaaagcacctttccatcaattgagaatatcctatggtact
aacaaaggaaaaaactacactgaagaagaggatcgttttctgatttgtatgcttcacaag
cttggatttgacaaggaaaatgtttatgatgagttgcgacagtgtattcgaaattctcct
cagtttagatttgactggtttcttaagtccagaactgcaatggaactccagaggaggtgt
aataccttgattactttgattgaaagagaaaacatggaactagaagaaaaggagaaggca
gagaaaaagaaacgaggaccaaagccttcaacacagaagcgtaaaatggatggagcacct
gatggtcgaggaagaaaaaagaagctgaaactatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (10)   
   Pfam (10)   
All databases (49)   

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