KEGG   Oryctolagus cuniculus (rabbit): 100346627
Entry
100346627         CDS       T03373                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100346627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100346627
   03036 Chromosome and associated proteins [BR:ocu03036]
    100346627
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100346627
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     100346627
    COMPASS/SET1 complex (yeast)
     100346627
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 SMN_Tudor MinC_C
Other DBs
NCBI-GeneID: 100346627
NCBI-ProteinID: XP_002713282
Ensembl: ENSOCUG00000008564
UniProt: G1SVE5
Position
9:96746676..96770307
AA seq 313 aa
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgaccgacagcgtgctgcggagcttccgcgtcgccaaggtgttccgcgagaac
tccgacaagattaactgctttgacttcagccccaacggcgagacggtgatctcgagcagc
gacgacgactccatcgtgctctatgactgccaggagggcaaaccaaagagaaccttgtac
agtaagaaatatggcgtggatctcatcagatatactcatgcagcaaacacagttgtttac
agctcaaacaaaatagacgatactattcgttacctgtcattgcatgacaacaaatatatc
agatactttcctggacatagcaaaagggtggtggccttgtctatgtcacctgtggatgac
actttcatttctgggtctcttgataagaccattcgactctgggatctccggtctcctaac
tgccagggtctgatgcatctacagggcaaaccagtttgttcttttgacccagaagggttg
atttttgctgcaggtgtcaactctgaaatggttaaactttatgatcttcgctcttttgat
aaggggccatttgcaacctttaagatgcagtacgatcggacttgtgaatggacaggactt
aagttcagcaatgatggcaagctcattcttatctccaccaatggcagcttcatccgtctc
attgatgcattcaagggagtggtgatgcacacatttgggggttatgccaacagcaaagct
gtcacgctggaggcttcatttactcctgactctcagtttattatgattggttcagaggat
ggcaagatccatgtttggaatggagaaagtggtataaaagttgctgtgttggatggtaaa
cacacaggccccatcacctgtttgcagttcaaccccaagttcatgacctttgccagcgca
tgttccaacatggctttctggttgcccaccattgatgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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