KEGG   Oryctolagus cuniculus (rabbit): 100352672
Entry
100352672         CDS       T03373                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO alpha chain
  KO
K06752  MHC class II antigen
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04514  Cell adhesion molecules
ocu04612  Antigen processing and presentation
ocu04640  Hematopoietic cell lineage
ocu04658  Th1 and Th2 cell differentiation
ocu04659  Th17 cell differentiation
ocu04672  Intestinal immune network for IgA production
ocu04940  Type I diabetes mellitus
ocu05140  Leishmaniasis
ocu05145  Toxoplasmosis
ocu05150  Staphylococcus aureus infection
ocu05152  Tuberculosis
ocu05164  Influenza A
ocu05166  Human T-cell leukemia virus 1 infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05310  Asthma
ocu05320  Autoimmune thyroid disease
ocu05321  Inflammatory bowel disease
ocu05322  Systemic lupus erythematosus
ocu05323  Rheumatoid arthritis
ocu05330  Allograft rejection
ocu05332  Graft-versus-host disease
ocu05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100352672
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100352672
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100352672
   04612 Antigen processing and presentation
    100352672
   04658 Th1 and Th2 cell differentiation
    100352672
   04659 Th17 cell differentiation
    100352672
   04672 Intestinal immune network for IgA production
    100352672
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100352672
   05164 Influenza A
    100352672
   05168 Herpes simplex virus 1 infection
    100352672
   05169 Epstein-Barr virus infection
    100352672
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100352672
   05152 Tuberculosis
    100352672
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100352672
   05140 Leishmaniasis
    100352672
  09163 Immune disease
   05310 Asthma
    100352672
   05322 Systemic lupus erythematosus
    100352672
   05323 Rheumatoid arthritis
    100352672
   05320 Autoimmune thyroid disease
    100352672
   05321 Inflammatory bowel disease
    100352672
   05330 Allograft rejection
    100352672
   05332 Graft-versus-host disease
    100352672
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100352672
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100352672
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocu04147]
    100352672
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100352672
  Exosomal proteins of epithelial cells
   100352672
  Exosomal proteins of breast milk
   100352672
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 C2-set_2
Other DBs
NCBI-GeneID: 100352672
NCBI-ProteinID: XP_008260989
UniProt: A0A5F9DE57
Position
12:132233487..132239096
AA seq 252 aa
MALRAGLVLGLHTLRILLSPKEAGAITADHMGSYGPAFYQSYDASGQFTYEFDGEQLLSV
DLKEKEAVWRLPEFGDLARFDPQGGLAGIAMIQMHLDVLVERSNRTRATSVRPSVTVFPK
SPVELGQPNTLICVVDNIFPPVINISWLRNGETVTLGVTQTSFYSRPDHLFRKFHYLAFV
PSAADVYDCRVEHWGLDAPLLTHWEPQVPTPLPDTTETLVCVLGLAFGLVGFLVGTILII
TGTRMSRAAPRS
NT seq 759 nt   +upstreamnt  +downstreamnt
atggccctccgtgccgggctggtcctgggactgcacaccctgaggatcctcctgagcccg
aaggaagcaggtgccatcacggctgaccacatgggctcctacggaccagccttctaccag
tcttacgatgcctcgggccagttcacctatgagttcgacggggagcagctgctgtccgtg
gacctgaaggaaaaggaggcggtgtggcgtctgcctgagtttggcgacttggcccgcttt
gacccacagggcgggctggctggcattgccatgatccagatgcatctagatgtcttggtg
gaacgctccaaccgcaccagagccaccagcgtgcgcccaagcgtgaccgtcttccccaag
tctccagtggagctgggccagcccaacaccctcatctgtgtcgtggacaacatcttcccc
cctgtgatcaacatcagctggctgcgcaatggcgagacggtcaccttgggagtgacccag
accagcttctactcccggcccgaccacttgttccgcaagttccactacctggccttcgtg
ccctccgctgccgacgtctacgactgcagggtggagcactggggcctggacgcgccgctc
ctcacgcactgggagccacaggtgcccaccccactgccagacaccacggagaccctggtc
tgtgtgctgggcctcgccttcggcctggtgggcttccttgtgggcaccatcctcatcatc
actggcacacgcatgtccagagctgcccccaggtcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (24)   
   KEGG PATHWAY (24)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (48)   

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