KEGG   Oryctolagus cuniculus (rabbit): 100354107
Entry
100354107         CDS       T03373                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
  KO
K22753  E3 ubiquitin-protein ligase RNF6 [EC:2.3.2.27]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100354107
Enzymes [BR:ocu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100354107
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100354107
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-ANAPC11 zf-RING_UBOX zf-C3HC4_3 zf-RING_5
Other DBs
NCBI-GeneID: 100354107
NCBI-ProteinID: XP_002712839
UniProt: G1T9R7
Position
8:complement(72660531..72671442)
AA seq 683 aa
MNQSRSRSDGGGEEASSQDQDHHENERRWQQERLHREEAYYQFINELNDEDYRLMRDHNL
LGTPGEITSEELQQRLDGVKEQLASQPDLRNATSNRDPTVPRESSNEDSLLEWLNTFRRT
GNATRSGQNGNQTWRAVSRTNPNSGEFRFSLEIHINHENRGLEIDGEDYMHIPLSDINRD
HTRSRQQRSSSPVASRTRSQTSMNFNGGGSNTPRTRLGSRGRNSVEGSSSPLGRLRNGIR
GTAGIPRTNASHPNLSSHTNQSGGSELRQREGQRFGAAHVWENGARTNVTVRNTNQRLEP
IRLRSTFSSRSRSPIQRQSGTVHNSQREGRPVQQTTRRSVRRRRGLTHVFVEQDRGRRGT
AYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITLDLQVRRIRPGENRDRDSIANRTR
SRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVSTITVPLRRISENELVEPSSVALRS
ILRQIMTGFGELSSLMEAESESEIQRHDQHLPEMHSELSNLATANDSSQHSEGSSQDMRA
QDDSIEMHGENESTQPHSQNHDSRGGRQLRNSNNLVETGTLPILRLAHFFLLNEGDDDDR
IRGLTKEQIDNLSTRNYEHNSFDSELSKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRW
LSENCTCPICRQPVLGSSIVNNG
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgaatcagtctagatctagatcggatggtggtggtgaagaggcttcatctcaagaccag
gatcatcatgagaatgagagaaggtggcagcaagagcgtctccacagagaagaagcctat
taccagtttattaatgaactcaatgatgaagattatcggctaatgagagatcataatctt
ttaggcacccctggagaaataacatcagaagagctgcagcagcggttagatggagttaag
gaacaattagcatctcagcctgacctgagaaatgcgacaagcaacagagacccaacagtc
ccgagagaaagttcaaatgaagattccctgcttgaatggctgaacacctttcgtcgcaca
ggaaatgcaactcgaagtggacaaaatgggaaccaaacttggagagctgtgagtcgaaca
aacccaaacagtggagagtttcggtttagtctggaaatccacatcaatcatgaaaataga
ggacttgaaattgatggagaagattatatgcacattccactttcagatattaacagagat
cacactagaagtaggcaacaaagatcaagtagtcctgtggctagtcgaacaagaagccaa
acctcaatgaattttaatggtggtggttccaacactccaaggactaggcttggttcaagg
gggcggaattcagtcgaaggatcatcctcaccattgggaaggttgagaaatggaattagg
ggcacagctggcatccctagaacaaatgcttcacaccctaatttgagtagtcatacaaat
cagtcaggtggcagtgaactcaggcaaagggaggggcaacgatttggggcagcacatgtt
tgggaaaatggggctagaactaatgttacagtgaggaatacaaaccaaagattagagcca
attagattacgatctaccttcagtagtcgaagccggtcaccaattcagagacagagcggc
actgttcataattcccaaagggaaggtagacctgtacagcaaaccactagaaggtctgtt
aggagaagaagaggtctaactcatgtctttgtagagcaagatagaggacgcagaggtacc
gcatataccccattctcgaattcaagacttgtgtcaagaatcacagtagaagaaggtgaa
gaatccagcagatcctcaactgctgtacgacggcatccaacaatcaccctggaccttcaa
gtgagaaggattcgtcctggggaaaatagagatcgggatagtattgcaaacagaactcga
tcgagagtagggctagcagaaaatacagtcactattgaaagcaatagtgggggctttcgc
cgaactatttctcgtttagagaggtcagggattcgaacctacgtgagtactattacagtt
cctcttcggaggatttctgagaatgaacttgttgagccatcatcagttgctctgaggtca
attttaaggcagatcatgactgggtttggagaattgagttctctaatggaggctgaatct
gagtcagagattcaaagacatgatcagcacttgccagagatgcactcagaactgagtaac
ttagctacagctaacgacagcagccagcacagtgaaggttcctctcaagacatgagggcc
caagatgacagcattgaaatgcatggggaaaatgagagcacccagcctcatagccaaaac
catgacagtagaggtggcaggcagttgcgaaattcaaacaatttagttgagactgggacc
ctacctattcttcgccttgctcatttctttttactaaatgaaggtgatgatgatgaccga
atccgtggtttaaccaaagagcagattgacaatctttccactaggaactatgagcataac
agttttgatagtgagctaagtaaaatctgtagtgtttgcatcagtgactacgtaactgga
aacaagctcaggcagttaccttgcatgcatgagtttcacattcattgtattgaccggtgg
ctctccgagaattgcacttgtcccatctgtcggcagcctgttctagggtccagtatagta
aacaatgggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (44)   

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