KEGG   Oryctolagus cuniculus (rabbit): 100354287
Entry
100354287         CDS       T03373                                 
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
  KO
K08525  retinoid X receptor beta
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03320  PPAR signaling pathway
ocu04659  Th17 cell differentiation
ocu04919  Thyroid hormone signaling pathway
ocu04920  Adipocytokine signaling pathway
ocu04928  Parathyroid hormone synthesis, secretion and action
ocu05200  Pathways in cancer
ocu05202  Transcriptional misregulation in cancer
ocu05207  Chemical carcinogenesis - receptor activation
ocu05216  Thyroid cancer
ocu05222  Small cell lung cancer
ocu05223  Non-small cell lung cancer
ocu05226  Gastric cancer
ocu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    100354287
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100354287
   03320 PPAR signaling pathway
    100354287
   04919 Thyroid hormone signaling pathway
    100354287
   04928 Parathyroid hormone synthesis, secretion and action
    100354287
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100354287
   05202 Transcriptional misregulation in cancer
    100354287
   05207 Chemical carcinogenesis - receptor activation
    100354287
  09162 Cancer: specific types
   05226 Gastric cancer
    100354287
   05216 Thyroid cancer
    100354287
   05222 Small cell lung cancer
    100354287
   05223 Non-small cell lung cancer
    100354287
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100354287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocu03000]
    100354287
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ocu03310]
    100354287
Transcription factors [BR:ocu03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100354287
Nuclear receptors [BR:ocu03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100354287
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 100354287
NCBI-ProteinID: XP_002714529
Ensembl: ENSOCUG00000011590
Position
12:132133474..132139558
AA seq 535 aa
MSWAARPPFLPERHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAVAAGEQ
QTPEPEPGEAGRDGMGDSGRDSRSPDSSSPAPLTQGLSPPSPPGPPLPASAAPSLGGSGA
PPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGAGPPED
VKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLT
YSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEE
MPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIP
HFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFD
RVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQK
YPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgtcttgggccgctcgcccgcccttcctccccgagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatccggcggcggcggcggcggcggcggcggcagtagcagccggagaacaa
caaaccccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgg
gactcccgaagcccagacagctcctccccagccccccttacacaggggctctccccccct
tctccacctgggccacccctccccgcttcagcggccccatcccttggaggctctggggcc
ccacccccacccccgatgccaccccctccactgggctcccccttccccgtcatcagttct
tccatggggtcccctggcctgccccctccagctcccccaggattctccgggcctgtcagc
agcccccagattaactcaacagtgtcgctccctgggggtggggctggcccccctgaagat
gtgaagccacccgtcttaggggtccggggcctgcactgtccaccccctccaggtggccct
ggagctggcaaacggctgtgtgcaatctgcggggacagaagttcaggcaaacactacggg
gtctacagctgtgagggctgcaagggcttcttcaagcgcaccatccgcaaggacctcacc
tactcgtgccgcgacaacaaggactgcacggtggacaagcgccagcggaaccgctgtcag
tactgccgctaccagaaatgcctggccacgggcatgaagagggaggcagtacaagaggag
cgccagcggggcaaggacaaggatggggatggggagggggctgggggagcccccgaggag
atgcccgtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggc
gttgagggccctgggggaaccggggggagcggcagcagtccaaatgaccccgtgactaac
atctgccaggcagctgacaaacagctgttcacgctggttgaatgggcgaagaggatccca
cacttttcctccttgcctctggatgaccaggtcatactgctgcgggcaggctggaacgag
ctcctcattgcttctttctcccaccggtccattgatgtccgagacggcatcctcctcgcc
acgggtcttcacgtgcatcgcaactcagcccattctgcaggcgtgggagccatctttgat
cgggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagctt
ggctgcctgagggcaatcattctgtttaatccagatgccaagggcctctccaaccccagc
gaggtggaggtcctacgggagaaggtgtacgcctccttggagacctactgcaaacagaag
taccccgagcagcagggacggtttgccaagctgctgcttcgtcttcctgctctccgctcc
atcggccttaagtgtctagaacatctgtttttcttcaagctcattggcgacacccccatc
gacaccttcctcatggagatgcttgaagctccccaccagctggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (69)   

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