KEGG   Oryctolagus cuniculus (rabbit): 100355526
Entry
100355526         CDS       T03373                                 
Name
(RefSeq) syndecan-2 isoform X2
  KO
K16336  syndecan 2
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04514  Cell adhesion molecules
ocu04820  Cytoskeleton in muscle cells
ocu05144  Malaria
ocu05205  Proteoglycans in cancer
ocu05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100355526
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100355526
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    100355526
  09174 Infectious disease: parasitic
   05144 Malaria
    100355526
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100355526
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ocu04090]
    100355526
   00535 Proteoglycans [BR:ocu00535]
    100355526
CD molecules [BR:ocu04090]
 Proteins
  100355526
Proteoglycans [BR:ocu00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   100355526
SSDB
Motif
Pfam: Syndecan DUF2721 Glycophorin_A Cadherin_C_2 Dsc3_C ATG22
Other DBs
NCBI-GeneID: 100355526
NCBI-ProteinID: XP_008253994
Ensembl: ENSOCUG00000002662
UniProt: A0A5F9CDS8
Position
3:112005710..112129505
AA seq 220 aa
MRRAWILLTLGLVACVSAESAGPKPLIYPNVGVNILGLQRAELTSDKDMYLDNSSIEEAS
GVYPIDDDDYASASGSGADEDIESPELTTSRPFLKIPFTSAAPKVETTTLKIQNKMPAQT
KSPEEIDKEKVHLSDSERKMDPAEEGTNVFTEKHSDNLFKRTEVLAAVIAGGVIGFLFAI
FLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
NT seq 663 nt   +upstreamnt  +downstreamnt
atgcggcgtgcgtggatcctgctcaccttgggcttggtggcctgcgtgtcggcagagtcg
gctgggcccaaacccctgatttacccaaatgttggagttaacattctcggtctccagcga
gcagagctgacatctgataaagacatgtaccttgacaacagctccattgaagaagcgtcg
ggagtgtatcctattgatgacgatgactatgcttctgcgtctggctcgggagctgatgag
gacatagagagtccagagctgacaacatctcgaccatttctaaagataccattcactagt
gctgctcccaaagtggaaaccacaacactaaagatacaaaacaagatgcccgcccagacg
aagtcaccggaagaaattgataaggaaaaagttcacctctctgactcagaaaggaaaatg
gacccagctgaagagggcacaaacgtgttcaccgagaaacactcagacaatctgtttaaa
cgaacagaagtccttgcagctgtcattgccgggggagtcatcggctttctctttgcaatc
ttccttatcctgctgttggtgtatcgcatgagaaagaaggatgaaggcagctatgacctt
ggagaacgcaaaccatccagtgctgcttatcagaaggcacctactaaggagttttatgca
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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