KEGG   Oryctolagus cuniculus (rabbit): 100355578
Entry
100355578         CDS       T03373                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX54
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ocu03009]
    100355578
Enzymes [BR:ocu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100355578
Ribosome biogenesis [BR:ocu03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    100355578
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT ResIII
Other DBs
NCBI-GeneID: 100355578
NCBI-ProteinID: XP_008270498
Ensembl: ENSOCUG00000008932
Position
21:complement(9345518..9360251)
AA seq 871 aa
MAAGRRTAAGPRSRPAMAQWRKKKGFRKRRDAASQARDSDSEDGEFEIQAEDDARARKLG
PGRALPTFPAPECAPDLELDTRQMVRAQQRKKKSGGFQSMGLSYPVFRGVMKKGYKVPTP
IQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQ
TLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSV
EYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL
DVDAKLNEQLKTSYFLVREDTKAAVLLHLLRNVVRPQDQTVVFVATKHHAEYLTELLTTQ
GVSCAHVYSALDHTARKINLAKFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGKL
FLHRVGRVARAGRSGTAYSLVAPEEVPYLLDLHLFLGRSLTLARPHEEPAGPAGGDGVLG
RVPQSVVDDEDGSLRHTLEARLELRGLGRVADNAQRQYVRSRPAASPASIKRAKELELAT
LGLHPLFSSRFEQEELQRLQLVDGIKQYRTRATIFEINASSRDPSSQVMRAKRQKDHKAI
ASFQQGRQERQEGPAGPVASCPAPQQELQEEEEGVEAVFTEVVGRKRRRPGPDRGAKRRR
EEARQRDQEFYVPYRPKDFDSERGLSVGGAGGAFEQQVAGAVLDLMGDEAQSLTRGQQRL
RWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEDEGAADR
RGPERTGRKRGRGQGASQPRAPGGPAGRVRSELKTKQQILKQRRRAQKMRFLQRGGLKQL
SARNRRRAQELRQGAFGRGAPSKKGKMRKRM
NT seq 2616 nt   +upstreamnt  +downstreamnt
atggcggccggcaggcgcacggcggccggacctcggtcgcgacccgccatggcgcagtgg
aggaagaagaaggggttccggaagcgccgagacgcggcctcccaggcccgcgacagcgac
tcggaggacggcgagtttgagatccaggcggaagatgacgcccgggcccgtaagctgggg
cccggcagagccctgcccaccttccccgccccggagtgcgccccggacctggagctggac
acccggcagatggtgcgggcccagcagcggaagaagaagtccggaggcttccagtccatg
ggcttgagctacccggtgttcagaggcgtcatgaagaaaggctacaaggtgcccacgccc
atccagaggaagaccatccccgtgatcctggacggcaaggacgtggtggccatggcccgg
acgggcagcggcaagacggcctgcttcctgctgcccatgttcgagcggctcaaggcccgc
agtgcccagactggggcccgcgcgctcatcctctcgcccacacgggagctggccctacag
accctgaagttcaccaaggagctgggcaagttcaccggcctcaagaccgccctgatcctc
ggtggggacaaaatggaagaccagtttgcggccctgcacgagaaccctgacataatcatt
gctactcccgggcggctggtgcacgtggccgtggagatgaacctgaagctgcagagtgtg
gagtacgtggtgtttgacgaagccgacaggctcttcgagatggggttcgccgagcagctg
caggagatcatcggccgcctccccgggggccaccagacggtgctgttctccgccacgctg
cccaagctgctggtggagttcgcccgggcaggcctcacggagcccgtgctcatccgcctg
gacgtggacgccaagctcaacgagcagctcaagacctcctacttcctggtgcgcgaggac
accaaggccgccgtgctgctccacctgctgcgcaacgtggtgcggccccaggaccagacg
gtggtgtttgtggccacgaagcaccacgccgagtacctcaccgagctgctgaccacccag
ggggtgagctgcgcccacgtctacagcgccctggaccacacggcccgcaagatcaacctg
gccaagttcacgcacggcaagtgctccgccctcatcgtcacggacctggccgcccggggc
ctggacatcccgctgctggacaacgtcatcaactacagcttccccgccaagggcaagctc
ttcctgcaccgcgtgggccgggtggcccgggccggccgaagcggcacggcctactccttg
gtggccccggaagaagtcccctacctgctggacctgcacctgttcctgggccgctccctg
accctcgcccgcccccacgaggagcccgcaggtcccgcgggcggcgacggcgtgctgggc
cgggtgccgcagagcgtggtggacgacgaggacggcagcctgcgccacaccctggaggcg
cggctggagctgcggggcctgggccgcgtggctgacaatgcgcagcgccagtacgtgcgc
tcgcgccccgcggcctcccccgcgtccatcaagagggccaaggagctggagctggcgaca
ctgggcctgcaccccctgttcagctcccgcttcgagcaggaggagctgcagcggctgcag
ctggtggacggcatcaagcagtaccgcacccgggcgaccatctttgagatcaacgcctcc
agccgggacccgagcagccaagtgatgcgcgccaagcggcagaaggaccacaaggccatc
gccagcttccagcaggggcggcaggagcgccaggaagggccggccggccccgtcgccagc
tgcccggccccgcagcaggagctgcaggaggaggaggaaggtgtggaggctgtcttcacg
gaggtcgtgggccggaagcggcggcggccaggacccgacaggggagccaagagacggagg
gaggaggcccggcagcgagaccaggagttctacgtcccctaccggcccaaagacttcgac
agcgagcggggcctgagtgtcggcggggccgggggcgccttcgagcagcaggtggctggt
gctgtcctggacctgatgggggacgaagcacagagtctgacccggggccagcagaggctc
aggtgggaccggaagaagaagcggtttgtgggccagtcggggcaggaggacaagaagaag
atcaagaccgagagtggccgctacatcagcagctcctacaagcgggacctctaccagaag
tggaaacagaaacagaaaattgatgatcgcgactccgaggacgaaggggcagctgaccgg
agaggccctgagcgaacgggcaggaagcgaggccgcggccaaggtgcatcccagccccgc
gcccctggcggccctgcaggccgcgtgcgctccgagctcaagaccaagcagcagatcctg
aagcagcggcgccgcgcccagaagatgcgcttcctgcagcgcgggggcctcaagcagctc
tcggcccgcaaccggcgccgcgcccaggagctgcggcagggcgccttcggccgcggcgcc
ccctccaagaagggcaagatgcggaagaggatgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system