KEGG   Oryctolagus cuniculus (rabbit): 100355727Help
Entry
100355727         CDS       T03373                                 

Gene name
DHX8
Definition
(RefSeq) DEAH-box helicase 8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100355727 (DHX8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocu03041]
    100355727 (DHX8)
Enzymes [BR:ocu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     100355727 (DHX8)
Spliceosome [BR:ocu03041]
 Complex C
  Other components
   Step II factors
    100355727 (DHX8)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: OB_NTP_bind HA2 S1 Helicase_C DEAD AAA_22 T2SSE AAA_19 Flavi_DEAD AAA_30 AAA_16 PhoH ABC_tran Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID: 100355727
NCBI-ProteinID: XP_008269776
Ensembl: ENSOCUG00000008014
Position
19
AA seq 1222 aa AA seqDB search
MAVAVATAGVLTGPEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDTEHRDRTKKKKRSRSR
DRDRDRDRDRDRERERERDHKRRHRSRSRSRSRTRERNKGKSRYRSRSRSPSPLKDRKDR
DKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHIS
ELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGET
NEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPD
FDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMM
QSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEW
KKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQI
TQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVI
KYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSA
TLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILV
FLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIA
TNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGK
CYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAM
EQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVF
YRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDI
RKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPS
SALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRL
EPLYNRYEEPNAWRISRAFRRR
NT seq 3669 nt NT seq  +upstreamnt  +downstreamnt
atggctgtggccgtggccacggccggggtcctgaccgggccggagccaggccccgcggaa
gagctcgccaaactcgaatatctgtctttagtgtcgaaggtgtgcaccgagttggacaac
cacttagggatcaacgacaaggatctcgctgaatttgtcatcagtcttgctgagaaaaat
accacctttgacacttttaaggcatctttggtcaaaaatggtgcagaattcacagattct
cttattagtaatttgctgcgtctcatacaaaccatgcggcctccagcaaagccgtccact
agcaaagatccagttgttaaacccaaaactgaaaaagaaaagctgaaggaactcttccca
gtcctttgtcagccagacaacccttccgttcggaccatgctggatgaagacgatgtgaaa
gttgctgtggatgtcctgaaagaactagaagcattaatgcccagtgcagcgggtcaggag
aaacagagagacaccgagcaccgggacaggacaaaaaagaagaagcggagtcggagccgg
gatcgtgaccgtgaccgagaccgtgaccgtgaccgagagcgagaacgagagcgagaccac
aagcggagacaccgatcccgctctcgatcacgttccaggactcgggagaggaataaaggg
aagtctagataccgatcgaggagcagaagcccaagtcctctgaaagaccggaaggatcga
gacaaatatggggagaggaatctggacaggtggcgggataagcatgtggaccgccctccc
cctgaagagcccgccatcggggacatttacaatggcaaagtgaccagcatcatgcagttc
ggctgctttgtgcagctggagggactaaggaagcggtgggaaggcctggtgcacatctct
gagctccgacgtgaaggccgcgtggccaacgtagctgatgtggtgagcaaaggccagagg
gtcaaggtcaaagtgctgtccttcactgggaccaagaccagcctgagcatgaaggatgtg
gatcaagaaactggagaagacctaaacccaaatcgacggcgaaatctagttggggaaacc
aacgaggagacttcgatgcggaatccagacagacccacccacctttcccttgtcagtgcc
cctgaagtggaggacgactcactggagcgcaagcgcctcacccgcatctctgacccagag
aagtgggagatcaagcagatgattgctgccaatgtactttccaaagaagagttccccgac
ttcgatgaagagactggcattctccctaaggtggatgacgaagaagatgaggatcttgag
attgaacttgttgaggaagaacctccattcctgagagggcacaccaagcaaagtatggac
atgagccccattaaaatcgttaagaacccagatggctccctctcccaagcagccatgatg
cagagtgccttggccaaagaaaggcgggaactcaagcaggcccagcgggaagctgagatg
gattctatcccgatgggactcaacaaacactgggttgatcctctgcctgatgcggaaggc
aggcagattgctgccaacatgaggggcattgggatgatgcccaacgacatccccgagtgg
aagaagcacgcctttgggggcaacaaagcttcttacgggaaaaagacccagatgtcaatc
ctcgagcagagggaaagcctgcccatctacaagctgaaggagcagctggtccaggctgtc
catgacaatcagatcctgattgttattggagagacaggatctgggaagacaacgcagatc
acccagtacctggcggaggcaggctacacgtccaggggcaagattgggtgtacccaaccc
cgaagggtggcagccatgtccgtggccaaaagggtgtcagaggagtttggttgttgctta
ggccaagaggtgggctacaccattcgatttgaggactgcaccagccccgaaacagtcatc
aagtacatgacggacgggatgttgctcagggagtgcctgatcgaccccgacctcacccag
tatgcaatcatcatgttggacgaggcgcacgagaggacgattcacactgacgtgctcttc
ggattgttgaaaaagaccgttcagaaacggcaagacatgaaactcattgtcacctcagcc
accttggatgcagtgaagttctcgcagtacttctatgaagcacccatcttcaccatccca
gggcggacctacccagtggagatactgtacacgaaggagcccgagacagattacctggat
gccagcctgatcaccgtcatgcagatccacctgacagagccgccaggtgacatcctggtc
ttcctgactggtcaggaagagatcgatactgcttgtgagatcctgtatgaaaggatgaag
tcgctgggacctgatgttccagagttaatcatcctcccggtgtactctgctcttcccagt
gagatgcagacccgaatcttcgacccagctccacctggcagcagaaaggttgtgattgcc
accaacattgcggagacgtcactgaccatcgatggcatctactacgtggtggaccccgga
ttcgtgaagcagaaagtttacaattccaagacagggatcgaccagctcgtggtaacacct
atttcccaggctcaggcaaagcagcgagctggcagagctgggagaacaggtccagggaag
tgctacaggctgtacacagaacgtgcctaccgagatgaaatgctgaccaccaacgtgccg
gaaatccagagaaccaacttagcgagcacagtgctctcgctcaaggccatgggcatcaat
gacctgctctcctttgacttcatggatgccccacccatggagaccttgatcacagccatg
gagcagctgtacacactgggggccctggacgacgagggcctgctcacccgcctgggccgc
aggatggcagagttccctctggagcccatgctgtgcaaaatgctcatcatgtctgtgcat
ctgggttgcagtgaggagatgctgaccatcgtgtccatgctgtctgtgcagaacgtcttc
taccggcccaaggataaacaagccctcgcggatcagaagaaggccaaattccaccagacc
gaaggggaccacctcaccctgctggccgtgtacaactcctggaagaacaacaaattctct
aacccctggtgctatgagaactttatccaggctcgttccctgcgccgagctcaagacatt
cgcaaacagatgttaggcataatggacagacacaagttggatgtggtctcctgcggcaag
tccacggtccgagtgcagaaagccatctgcagcggcttcttccgtaatgctgccaagaaa
gacccccaagagggctaccggacgctgattgaccagcaggtggtctacatccatccttcc
agcgctctcttcaacaggcagccagagtgggtggtgtaccacgaactggtgctgaccaca
aaggagtacatgcgtgaggtcaccaccatcgaccctcggtggctcgtggagttcgccccc
gccttcttcaaggtctctgacccaaccaagctgagcaagcagaagaagcagcagcgtctt
gaacccttgtacaaccggtatgaggagcccaatgcctggagaatatcccgggccttccgg
cggcgctga

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