KEGG   Oryctolagus cuniculus (rabbit): 108178368
Entry
108178368         CDS       T03373                                 
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03050  Proteasome
ocu03440  Homologous recombination
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05017  Spinocerebellar ataxia
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    108178368
  09124 Replication and repair
   03440 Homologous recombination
    108178368
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    108178368
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    108178368
   05012 Parkinson disease
    108178368
   05014 Amyotrophic lateral sclerosis
    108178368
   05016 Huntington disease
    108178368
   05017 Spinocerebellar ataxia
    108178368
   05020 Prion disease
    108178368
   05022 Pathways of neurodegeneration - multiple diseases
    108178368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    108178368
   04131 Membrane trafficking [BR:ocu04131]
    108178368
   03051 Proteasome [BR:ocu03051]
    108178368
   03400 DNA repair and recombination proteins [BR:ocu03400]
    108178368
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     108178368
Membrane trafficking [BR:ocu04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    108178368
Proteasome [BR:ocu03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     108178368
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     108178368
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 108178368
NCBI-ProteinID: XP_017203888
Ensembl: ENSOCUG00000022225
Position
17:complement(32436157..32436517)
AA seq 70 aa
MSEKKQPVDLGLLEEDDEFEEFPAEDWAGLDEGEDAPVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtccgagaaaaagcagccggtagacttgggtctcctcgaggaggatgacgagttcgag
gagttccctgccgaagactgggctggtttagatgaaggtgaagatgcacctgtctgggag
gataattgggatgatgacaatgtcgaggatgacttctccaatcagttgcgagctgaactg
gagaaacatggttacaagatggagacttcataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (53)   

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