KEGG   Oerskovia sp. KBS0722: FFI11_008900
Entry
FFI11_008900      CDS       T06124                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
oek  Oerskovia sp. KBS0722
Pathway
oek03030  DNA replication
oek03430  Mismatch repair
oek03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:oek00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FFI11_008900
   03430 Mismatch repair
    FFI11_008900
   03440 Homologous recombination
    FFI11_008900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oek03032]
    FFI11_008900
   03400 DNA repair and recombination proteins [BR:oek03400]
    FFI11_008900
Enzymes [BR:oek01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FFI11_008900
DNA replication proteins [BR:oek03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FFI11_008900
DNA repair and recombination proteins [BR:oek03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FFI11_008900
SSDB
Motif
Pfam: RNase_T DUF5315
Other DBs
NCBI-ProteinID: QDW62645
Position
complement(1964227..1964925)
AA seq 232 aa
MSWTTGPLLGFDTETTGVDVTNDRIVTAALVRRVPGRSTEVRTWLVDPGVPIPAEAAAIH
GISTEHAVAHGVAPGPALEEIASLIAADLAIGVPVVAFNAAFDLSLLDAELARHALPTLG
ERLGREVTPVIDPLVLDRSLDRFRKGKRKLGDLCVHYGVTDGGNLHTADVDVLATLDVLE
AMTRVFPELAEQDLDSLHRHQITAHRAWAENFNTWRAGQGYVGAGASTAWPS
NT seq 699 nt   +upstreamnt  +downstreamnt
atgagctggacgaccggaccgctgctgggcttcgacaccgagaccaccggggtcgacgtc
acgaacgaccgcatcgtgaccgcggcgctcgtgcggcgcgtcccggggcggagcaccgag
gtgcggacctggctcgtcgatcccggcgtccccatccccgcggaggcggccgcgatccac
ggcatctcgaccgagcacgcggtcgcgcacggggtggccccgggaccggccctcgaggag
atcgcgtcgctcatcgccgcggacctcgcgatcggcgtgccggtcgtcgcgttcaacgcg
gcgttcgacctgtccctgctcgacgccgagctcgcacgccacgcgctgccgacgctgggc
gaacggctgggacgcgaggtcacgcccgtgatcgacccgctcgtgctcgaccgctcgctc
gaccgcttccgcaagggcaagcgcaagctcggcgacctgtgcgtgcactacggcgtgacc
gacggcggaaacctccacaccgcggacgtcgacgtcctcgcgacgctcgacgtgctcgag
gccatgacccgcgtcttccccgagctcgccgagcaggacctcgactcgctgcaccgccac
cagatcacggcccaccgggcctgggcggagaacttcaacacctggcgcgccgggcagggg
tacgtcggcgcgggcgccagcaccgcctggccgtcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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