KEGG   Olea europaea var. sylvestris (wild olive): 111394374
Entry
111394374         CDS       T05244                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020  RNA polymerase
oeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111394374
  09124 Replication and repair
   03420 Nucleotide excision repair
    111394374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oeu03021]
    111394374
   03400 DNA repair and recombination proteins [BR:oeu03400]
    111394374
Transcription machinery [BR:oeu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111394374
  RNA polymerase III system
   RNA polymerase III
     111394374
  RNA polymerase I system
   RNA polymerase I
     111394374
DNA repair and recombination proteins [BR:oeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111394374
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF3557 HEPN_AbiV
Other DBs
NCBI-GeneID: 111394374
NCBI-ProteinID: XP_022875924
Position
5:1932914..1938848
AA seq 268 aa
MLINKFLSPNLITPSPNRKITHAFTLSKPRRIIPSLSLLSVDSVSTLSTLCRLHAYTSIR
AKMVLSDEEIARLFRIRKTVMQMLRDRGYTVGDFEIDMSKHQFLSKYGENMKREDLIIIK
ELRSNPSEKIYVFFPEEAKVGVKTMKTYTNRMKDDDVHRAILVVQHNLTPFARTCISEIS
TKFHLEVFQEAELLVNIKEHVLVPEHQLLTPEEKKSLLERYTVKETQLPRIQVTDPISRY
YGLKRGHVVKIIRPSETAGRYVTYRYVV
NT seq 807 nt   +upstreamnt  +downstreamnt
atgcttataaataagtttttgagcccaaatctcataaccccaagcccaaacagaaaaata
acccatgcatttaccctttccaagcctagacgtatcatcccttctctctcgcttctctct
gtcgactctgtctctacgctatctacgctctgccggctgcacgcctatacaagtatacgt
gcaaagatggttctgtcagatgaggaaattgcacggctcttcagaatcaggaagacggtg
atgcagatgctgagggataggggttacacagtaggtgattttgagattgatatgtcgaag
catcagttccttagcaagtacggcgagaacatgaagagggaggacctcattatcatcaaa
gaattgcgtagcaatccctctgaaaagatatacgtgttctttcctgaggaggcaaaggtt
ggtgttaagacaatgaagacttataccaatcgcatgaaagatgatgatgttcatcgagcg
atcttagttgtccagcataatttaactccttttgctcggacctgtataagtgaaatatct
acaaaatttcacttggaggttttccaggaggcagagttgttggtcaacataaaagagcac
gttcttgttcctgagcaccaattgcttacccctgaagaaaagaagtctttgctagaaaga
tacactgtgaaggaaacacagctaccccgcattcaggtaaccgatccaatttcaagatat
tatggcctgaagcgtggacacgtcgtgaaaattatccgaccaagtgagactgctggacgt
tatgtaacttaccgatacgtagtttaa

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