KEGG   Olea europaea var. sylvestris (wild olive): 111399384
Entry
111399384         CDS       T05244                                 
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    111399384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oeu03400]
    111399384
DNA repair and recombination proteins [BR:oeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     111399384
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II AAA_29
Other DBs
NCBI-GeneID: 111399384
NCBI-ProteinID: XP_022882428
Position
9:complement(1863120..1873696)
AA seq 1109 aa
MQRQKSILSFLKRPAPDDKNSGGFEPEGRPAHSLQAEKPNQNAVVLNKARDVSDEEIRGT
ETPPEKLPRQIFSVNDGESTTPTRPSLFSSIKHKFMKPDTREKPSVDRFHVNDTSSGTFS
LPIKHAVPEELGNACLFPEHLSKQNGHNANETMYSEGDKERPFLINIDDDVSGPVTPGTA
PLVPRLKRVQEDMCNSKDRSDCLLPDARKRTKLIQLSNRANKVNEDVSETKSKFEWLHLS
QIRDVNRRKPDNPLYDKKTLYIPPEDLKKMSASQKQYWDVKRQYMDVVLFFKVGKFYELY
ELDAEIGHKELDWKMTQSGVGKCRQVGISESGIDEAVQKLIARGYKVGRVEQLETSEQAK
SRGAGSVIQRKLVHVLTPSTTESNIGPDAVHLLAIKEFDSMEGHLLENGSTVFGFAFVDC
AALKFSVGSISDDASCAALGALLMQVSPKEIIYEARGLSKECQKALKKYTLAGSTLSQLS
PAQPGHDFGEVLEVRNLIQSKGYFRGSCIRWDHVLDGVMHGDLALCALGGLINHLSRFKL
DDALRNGDIIPYEVYRGCLRMDGQTLVNLEIFNNNADGGPSGTLYKYLDNCMTSPGKRLL
RNWICHPLNDVEKINSRLAVVEELMSHSEIVLLLAQSLRKLPDLERLLGRAKSSMQSSAL
LSLPLIGSKVLKQRVKVFGLLVKGLRIGLELLMLLQNEGIMVSSLSKVVCLPILSGSDGL
DKFLTQFEAAVDSEFPNYQDHDVTDSESETLVILMDLFLEKATQWSQVIQAINCIDVLRS
FAVTTISSCGAMCKPMILPHSKSTNLCEETTGPILKMEGLWHPYTLGQNGGLPVSNDIQL
GGYRNDYAPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCEICVFSLVDTIFTRLG
ASDQIMTGESTFLIECTETASVLQNATHNSLVLLDELGRGTSTFDGYAIAYAVLRHLIEK
VNCRLLFATHYHLLTKEFGTHPRVALQHMATSLIPKSEMSSGVEQEIVFLYRLASGACLE
SYGMQVALMAGIPRLVVEAASKAGHVMKNKVRESFKSSEQRVKFSTLHEEWLKALLTISK
SDDNNFDTDAFDTLFCMWHELKTSYKSLN
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgcagagacagaaatccattctctcatttctgaagagaccagcgccggatgacaaaaat
tccggcggattcgaaccggaaggccggccggcccactctttgcaggcggaaaagcctaat
caaaacgccgtcgtactaaataaagctagagatgtctcggatgaagaaataagaggaaca
gagactccaccggagaagttgccacgtcagatattctccgttaatgacggcgaaagcacc
acccccaccaggccttctctcttctcaagcattaagcacaaattcatgaaacccgacacc
agagaaaaaccttccgttgacaggttccatgtaaacgatacttcgtctggcactttctct
cttccaataaaacatgctgtaccagaagagctgggcaatgcatgtttatttcctgagcat
ctcagcaaacaaaatggtcacaatgccaatgaaaccatgtatagtgaaggagacaaagag
cgccccttcctaatcaatattgatgatgatgtttctgggccagtcacaccgggcacggca
cctcttgttcctcgtttaaagagagtccaggaggacatgtgtaattccaaggatagaagt
gattgcttattaccggatgctaggaaaagaacaaaacttattcagctgtccaatagggca
aataaagttaatgaagatgtatctgaaacgaaaagcaagtttgaatggcttcatctttct
caaatcagggatgtcaacagaagaaagccagacaatcctctttatgacaagaagacactt
tacattcctccagaggatttgaaaaagatgtcagcgtctcagaagcagtattgggatgtc
aaacgtcagtatatggatgtggtcctcttctttaaagtgggaaagttttatgagctctat
gaattagatgctgaaattggtcacaaggaacttgattggaaaatgacacaaagtggtgtt
ggaaaatgtcgacaggtcggcatatctgagagtggtattgatgaagctgttcagaagttg
atagctcgtgggtacaaggttgggcgggtggaacagctagagacatctgaacaggcaaaa
tccagaggtgctggttctgtcattcaaaggaagttggttcatgtactcacaccatctact
actgagagtaatattgggccagatgcagttcatcttctagccataaaggagtttgattca
atggagggccatttgctggagaatggatcaacagtatttgggtttgcatttgtggattgt
gctgctttaaaattttccgttggttccatcagcgatgatgcatcctgtgcagctttgggg
gctttgttaatgcaagtgtcaccaaaggaaattatatatgaagcaagagggctctccaaa
gaatgtcagaaagcgcttaaaaagtacacattagctggatcaactctgtcacaattgagt
ccagctcagcctggtcacgattttggtgaggtcttggaagttagaaatctcattcagtca
aaaggatacttcagaggatcttgcattaggtgggatcatgtactcgatggagttatgcat
ggcgatcttgcattatgcgctcttggtggacttataaatcatttatcccgatttaagtta
gatgatgccctccgtaacggtgatattataccatatgaagtctacaggggttgccttaga
atggatggccagacgctagtcaatcttgaaattttcaataataatgctgatggtggccca
tcaggcactttgtacaaatatcttgataattgcatgacatcacctggaaagcggctctta
aggaactggatatgtcatcctctcaatgacgttgaaaaaataaacagtagacttgcagta
gttgaggagctgatgtcacattcagaaattgtgttactccttgctcaatctcttcgcaag
cttccagatttggaaaggttacttgggcgtgcaaagtccagcatgcagtcttctgcttta
ctatcattgcccttgataggcagcaaagtattgaaacagcgagtaaaagtgtttgggttg
ctagttaaaggcctacgaattgggttggaactcttgatgcttttgcaaaacgaaggaatc
atggtctcgtcattgtcaaaagttgtatgccttcctattctaagtggaagtgatgggctc
gacaaatttcttacccaattcgaggcagctgtagatagtgagttccctaattatcaggac
catgatgtcacagactcggagtctgaaacattagtaattctgatggatttatttttggag
aaagccacccaatggtctcaagtcatacaggccataaactgtattgatgtactaagatct
tttgcagtcaccacaatttcttcatgtggagctatgtgtaaacctatgattttgcctcat
tctaaatccacaaacttgtgtgaagaaaccacaggccctatacttaaaatggaagggctt
tggcatccttacacccttggtcagaatgggggattaccagtgtcgaatgatatccagctt
ggaggttacagaaatgattatgctccctgcacattgcttttgactgggccaaatatgggt
ggaaagtcgacccttttacgtgccacttgtcttgctgtaataatggctcagctaggatgt
tatgtgccttgcgaaatttgtgttttttcacttgtagacaccatatttactcggcttggt
gccagtgatcaaatcatgacaggcgagagtacatttctgattgagtgcacagagacagca
tcggtcttgcaaaatgctacgcataattctcttgttcttctcgatgaattgggtcgagga
accagcacgttcgatggatatgctattgcatatgctgtactgcggcatctaattgagaag
gtgaattgccgattactgtttgctacacactatcaccttctcactaaggagtttggtact
catcctcgggttgcattgcaacacatggccacttctttgataccaaaatctgaaatgtct
tctggagtcgagcaggagatagttttcctatatcgactagcctctggagcatgcttagaa
agctacgggatgcaagtagctctcatggcagggattcctcgactggtagttgaagcagct
tcaaaggctggtcatgttatgaaaaataaggttagagaaagtttcaagtcaagtgagcaa
agggtaaagttctcaacactgcacgaagagtggttgaaggcccttttaacaatttcaaag
tcagatgataataattttgatactgatgcgtttgatacattattttgcatgtggcatgag
ctgaaaacctcttataagtcacttaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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