KEGG   Olea europaea var. sylvestris (wild olive): 111408771
Entry
111408771         CDS       T05244                                 
Name
(RefSeq) polyadenylate-binding protein 5-like
  KO
K13126  polyadenylate-binding protein
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015  mRNA surveillance pathway
oeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111408771
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111408771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111408771
   03041 Spliceosome [BR:oeu03041]
    111408771
Messenger RNA biogenesis [BR:oeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     111408771
   mRNA cycle factors
    Stress granule specific factors
     111408771
Spliceosome [BR:oeu03041]
 Complex C
  Other components
   Complex C specific factors
    111408771
SSDB
Motif
Pfam: RRM_1 PABP RRM_5 RRM_occluded RRM_3 RRM_7
Other DBs
NCBI-GeneID: 111408771
NCBI-ProteinID: XP_022894311
Position
14:complement(2429987..2434352)
AA seq 638 aa
MAAMEPVQPPAVQNQSATMAASLIGVTPPSTPQIATAAVGAGGFSNSSLYVGDLEATVDE
SKLYDLFNQVAPVISVRVCRDQARRTSLGYAYVNFGTYQDASHAREVLNFTPINGKPIRI
MFSHRDPFLRKTGRANIFIKNLDDSIDNKALYDTFAVFGTVLSCKVAVDNSGCSKGYGFV
QFDQEEAAQNAIRRLNGMLINDKQVYVGTFVRRQERNSVDGSPIFTNVYVKNFSETTMEV
DLKKTFGKFGSITSAVVMKDTNGKSRCFGFVNYEHPEAAAAAVENLNGSLLEDKVLYVGK
AEKKVEREAKLRAKFEQERISRYEKLKDTNLYLKNLDDGMNDEKLKELFSEFGTITSCKV
MLDQNGVSKGAGFVAFSTPEEATKALSEMNGKMIGRKPLYVAVAQRKEERKAWLQAHFAQ
MRAPVGMLPLPAMPGFHLGAARFSPQQLYFGQVGPVMPPQAVGYGFQQQHVPGVRAGPPN
FVMPFRHQRQGPPGQHVGPRRVGNTQHQQQVQRNLNQGFSRYMINGRNGIDPPIVPTTTS
SSIQPAGPVSSSTLASALASATPENQQMMLGEQLYPLVERVECNLAGKVTGMLLEMDQTE
VLHLIESPDALRKKVGEAMDVLQSVASSDTGDNLGSLS
NT seq 1917 nt   +upstreamnt  +downstreamnt
atggcggcgatggaacctgttcagccaccggcggttcagaatcagtctgcgactatggcg
gcgagtttgataggagtgacgccaccgtcgactccgcagatagcgacggcggcggtaggg
gccggaggtttctcgaactcgtctctatatgtaggtgatctagaggctacggtggatgag
tcgaagctgtacgatttgttcaaccaggtggctcctgtgatctcggttagggtttgtagg
gatcaggctcgcaggacctcccttggctatgcctatgttaatttcggcacttatcaggat
gcatctcatgcaagagaggttttgaattttacccctatcaatgggaagcctattaggatt
atgttttctcatcgagatccttttctgaggaaaactggacgtgctaatattttcataaaa
aacttggatgattcaattgataacaaggcactgtatgacacttttgctgtctttgggaca
gtgctttcatgcaaggtagctgttgacaacagtggttgttcaaaaggttatggtttcgta
cagtttgatcaggaggaagctgcacaaaatgcaatcaggcgacttaatggcatgttgatt
aatgataaacaagtatatgttggcacttttgttcgtcgacaggaacgaaatagcgtggat
gggtcaccaatatttactaatgtttatgtgaaaaacttctctgaaactactatggaggtg
gaccttaagaaaacttttggaaagtttggttccatcactagtgcagttgttatgaaagac
acaaatggtaaatccagatgttttggcttcgtaaattatgaacacccagaagctgcagct
gctgctgttgagaacttgaatggatcattattagaggacaaggttttgtatgttggaaag
gctgaaaagaaagttgaaagagaggcaaaattgagagccaaatttgaacaagaaagaatt
agtagatatgagaaattgaaagatacgaacttatacttgaagaatcttgatgatggcatg
aatgatgaaaaactgaaggagttattttcagagtttggaaccatcacatcgtgcaaggtc
atgcttgatcaaaatggagtgagcaagggtgcaggttttgtggccttttccactccagaa
gaagctacgaaagctttgagtgaaatgaatgggaagatgattggaagaaaacctctatac
gttgctgttgctcagcggaaagaagaaagaaaggcttggcttcaggcgcattttgctcag
atgcgagcacctgtggggatgttacctttacctgcaatgcctggatttcaccttggtgca
gctaggttttccccacagcagctctattttggtcaagttggtcctgtgatgccacctcag
gctgttgggtatgggtttcagcagcagcacgtgcctggagtacgtgcaggtcctccaaat
ttcgtcatgcctttccgacatcaacgacaaggaccacctggacagcatgtgggtccgagg
agagttggaaacactcaacaccagcaacaggtgcagcgcaacttaaaccaaggttttagc
agatacatgatcaatggacgaaatggcatagatcctcccatagtcccaacaacaacttcc
tcaagcattcagcctgcagggccagtgtccagttcaacacttgcttctgctttggcttct
gctactccagaaaatcagcaaatgatgctaggtgaacagctttatccccttgtggaacgt
gttgaatgcaatcttgcaggaaaagtgacggggatgttgttagagatggaccaaacagag
gtgcttcaccttattgagtctccagatgctctgaggaagaaagtgggcgaggctatggat
gttcttcagtcagttgcatcatctgacactggcgacaaccttggttccttgtcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (40)   

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