KEGG   Olea europaea var. sylvestris (wild olive): 111412234
Entry
111412234         CDS       T05244                                 
Name
(RefSeq) cullin-4-like isoform X1
  KO
K10609  cullin 4
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03420  Nucleotide excision repair
oeu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111412234
  09124 Replication and repair
   03420 Nucleotide excision repair
    111412234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oeu04121]
    111412234
   03400 DNA repair and recombination proteins [BR:oeu03400]
    111412234
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oeu04147]
    111412234
Ubiquitin system [BR:oeu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     111412234
DNA repair and recombination proteins [BR:oeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111412234
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111412234
Exosome [BR:oeu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111412234
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 KCNQ_channel rpo30_N
Other DBs
NCBI-GeneID: 111412234
NCBI-ProteinID: XP_022898841
Position
16:14977568..14992736
AA seq 845 aa
MSQPTSTNPNKRSSPCSSTSNTAVATGDATAYFAGSSGATNFPAMKKAKSQAVAYSLDSN
KNSQQNITPHVHFADPPALSPMIEDDPSDVLEASPSSNLRAEAVGGHEGGTIANLSRKKA
TLPQPAKKLVIKLNKAKPTLPNDFEENTWAKLKSAIRAIFLKQPDPCDLERLYQAVNDLC
LHKMGGSLYQRIEKECEAYISAALQSLVGQSEDLMVFLSLVEKCWQDFCDQMMMIRGIAL
YLDRTYVKQTPNVQSLWDMGLQLFCKHLSLASKVEHKTVFGLLNMIESERLGEAAERTLL
NHLLNMFTALGIYPESFEKPFLERTSEFYAAEGVKYMQQSDVPDYLKHVEIRLQEEHERC
LIYLDSSTRKLLVATVESQLLERYISAILDKGFTMLMDGKRIEDLQRMYLLFSRVNALES
IRQALSLYIRGTGHVIVMDEEKEKDMVSSLLEFKANLDRIWEESFFKNEVFGNTIKESFE
YLINLRQNRPAELIAKFVDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKK
DLAKRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQAR
TKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNMYQDIFKEFYLSKYSGRRLMWQNSLG
QCVLKAEFPKGKKELAVSLFQAVVLMLFNDAQKLCFQDIKESTGIEDKELRRTLQSIACG
KFRVLHKIPKGRDVEDDDSFEFNDQFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQY
QVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPTDLKKRIESLIDREYLERDKSNPQI
YNYLA
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgtcgcaacccacctccacaaaccccaataagcgttcatccccttgctcctccacctcc
aacaccgccgtcgctaccggggacgctacagcctacttcgctggaagtagtggagccaca
aattttccagcaatgaagaaggccaagtcgcaggcggtcgcttactcactagacagcaat
aaaaacagccagcaaaatattacccctcacgttcacttcgccgacccccctgccctctct
cccatgatcgaagatgaccccagtgacgttctcgaagcctccccttcatccaaccttaga
gctgaagctgtaggtggccatgaaggtgggactattgctaatttatcgcggaagaaggcc
acactgccacagccagcaaaaaaactcgtcattaagctcaacaaagctaaaccaaccctg
ccaaatgatttcgaagaaaatacatgggcgaagctcaagtctgctatcagggcaattttt
ttaaaacaaccagatccctgtgacttggagaggctctatcaagcggtcaatgacctttgt
ctgcacaagatggggggaagtctctatcaaaggattgaaaaggaatgtgaagcttacata
tctgctgcactacaatctttggtcggccaaagtgaagatctgatggtttttttatcactt
gttgagaagtgctggcaagatttttgtgaccagatgatgatgattcgtggtatagcatta
tatcttgatagaacatacgtaaagcaaacaccaaatgtgcaatcactgtgggacatgggc
ttgcaacttttctgtaaacatctttctctggcttcaaaagtggagcacaaaactgtgttt
ggccttctaaacatgattgagagcgagagattaggtgaagcagctgagagaacactcctc
aaccatcttctgaatatgtttactgcattgggaatataccctgaaagctttgagaagcca
ttccttgaacgtacatctgaattttatgctgctgaaggtgtaaaatacatgcagcaatca
gatgttccagattatttgaaacatgttgagataaggttgcaagaagaacatgaaagatgc
ttaatctacctggattcaagtacaagaaagctgttagtagccactgtagagtcgcaactt
cttgaacgttatatatctgcaattctcgataagggttttacgatgctgatggatgggaag
cgtattgaggaccttcaaaggatgtatttgctcttctccagggtcaatgcccttgaatca
ataaggcaggcccttagtctatacatccgaggaactgggcatgtcattgtaatggatgaa
gagaaggagaaagatatggtatcgagcttattggaatttaaggcaaatcttgatagaata
tgggaagaaagcttctttaaaaatgaagtatttggcaataccatcaaggagtcatttgaa
tatctcattaatctccgccagaaccgacctgccgagctaattgccaaatttgtggacgag
aagcttcgtgctggaaacaagggtacatcagaggaggaattagaaggcacactggataaa
gtcttggttttattcagatttatacagggtaaggatgtatttgaagcattctataagaaa
gatcttgcaaaaaggctcttgttgggtaagagtgccagtatcgatgcagagaagtccatg
attaccaagttgaaaaccgagtgtggcagccaatttaccaataaactagaaggaatgttc
aaggacattgaattgtcaaaagagattaatgaatcattcaagcaatcatcccaagcacgg
acaaaactcccatcaggaatcgagatgagcgtccacgtcttaacaacagggtattggcca
acatatcctcccatggatgttaggctaccccatgaactgaacatgtatcaggatattttt
aaggagttctacctaagcaagtacagtgggaggcggttgatgtggcaaaactcattgggt
cagtgtgtgctgaaagcggaattccctaagggtaaaaaggagctggcagtttctctattt
caggctgttgtgttaatgctgtttaatgatgcacaaaagctctgcttccaagatattaag
gaatctactggcattgaagataaagaactgaggaggactttgcagtccattgcatgtgga
aaatttcgtgttcttcataaaattcccaaagggagagacgtggaggatgatgactccttt
gagttcaatgatcaatttactgctcctctctatcgtataaaggtaaatgccatacagatg
aaggaaacagtcgaggagaacacgagcaccactgaaagggtgttccaagatcgtcaatac
caggttgatgctgctattgttcggataatgaagactagaaaagtgcttagtcatacactg
ttaataaccgagctatttcagcagctcaagtttccaataaaaccaacggatttgaagaaa
aggattgagagcctcatcgaccgggagtacctggaacgtgacaaaagtaaccctcagata
tacaactatcttgcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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