KEGG   Oxalobacter formigenes: BRW83_0707
Entry
BRW83_0707        CDS       T04835                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ofo  Oxalobacter formigenes
Pathway
ofo02020  Two-component system
ofo02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ofo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BRW83_0707 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BRW83_0707 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ofo03021]
    BRW83_0707 (rpoN)
Transcription machinery [BR:ofo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BRW83_0707 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR TSP9
Other DBs
NCBI-ProteinID: ARQ45468
Position
complement(747705..749177)
AA seq 490 aa
MKQKLQTSFSQHLALTPQLQQSIRLLQLSSQELNQELEQALQENPLLERVDDPLATSTRL
SGDGSVISTTKQPETASHTDSGDFSGERTGDVSSNEEHTSDSERMDSLWNVPVPSERQPD
DERSKPQIEAPPESLREHLISQMRLSVISQRQRALVELIIDALDANGFLQESLPEMLEWL
PQELDISLKELEEALSCVQDFEPAGVGARTSAECLAIQIRLLPRIPYVVRKRAMNIVENH
LELFARHDFVRLKKVLECDDEDLKEAQEVIHRCNPHPGAIYATDTAETVIPEIIVSKKEN
CWVAELNPDAMPKIRVNQLYANILRESGSKAALSVQLREAKWLIRNINQRYETILKTSQA
IVERQQNFFSFGATSMRPLVLREIADTLGLHESTISRVSNQKFMRTPHGILELKYFFGSS
VATETGGEASSTAIREKIRQLIETEDKKKPLSDNRIAQLLERQGLVVARRTVAKYRDILK
IPPASLRKKL
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaaacaaaaacttcaaaccagctttagccaacatctagccttaaccccgcaattacag
cagtccatccgtcttctgcaactgtcgagccaggaactgaatcaggaactggaacaggcc
ttgcaggaaaatcctcttctggaaagagtggatgatcctttagccacttcaacgcgcctg
tcgggggatggttctgtcatatcgacgacaaaacagccggaaacagccagccataccgat
tccggagatttttccggcgaaagaacgggtgacgtttccagcaatgaagaacatacctcc
gattcagaacggatggacagtctctggaatgtcccggtaccatccgagcgtcaaccggac
gacgaacgttccaaaccccaaatcgaagcaccccctgagtccttgcgcgaacatttgatt
tcgcaaatgagactgtccgtcatcagccagcgccagcgtgcattggttgaattgatcatc
gatgccctggatgccaatggtttcctgcaggagagcttgcctgaaatgctcgaatggctc
cctcaagaactcgatatcagcctaaaagaactggaagaagccctctcctgcgtacaggat
ttcgaacctgccggggtaggtgccagaacgagtgctgaatgcctcgccatccagatccgt
ctgctgccccgtatcccgtatgtcgttcggaaacgggccatgaatatcgttgaaaaccac
ctcgagctgtttgcacgacacgattttgtccgtttgaaaaaagttctggaatgtgacgat
gaagacctgaaggaagctcaggaagtcattcaccgatgcaatccacatcctggggcgata
tatgctaccgacacggctgaaacggtcattcctgaaattatcgtcagcaaaaaggaaaat
tgctgggttgccgagctgaatcctgacgccatgccgaaaatacgggtcaatcagttgtat
gcaaatattttgagagaatcgggcagcaaggcagcgctttcagttcagcttcgggaggct
aaatggttgatcaggaatataaatcagcgatatgaaaccatactcaaaaccagtcaggcc
atcgtggagcgccagcagaatttcttctcttttggggcaacatcaatgcgccctcttgtt
ttgcgtgaaatagctgatacactaggactacacgagagcacaatatcccgtgtaagcaac
cagaaattcatgcgaaccccgcatggcattttagagttgaaatacttttttggaagttcg
gtcgcaacggaaactggtggggaagcgtcttctacagccattcgggaaaaaatcaggcaa
ctgattgaaaccgaagacaagaaaaagccactttctgacaacaggattgcacagcttctg
gaaagacagggtctggtcgtggcaagaagaacggtggcaaaatatcgcgacattctgaaa
atacctccagcttccctgagaaaaaaattgtag

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