KEGG   Oryzias latipes (Japanese medaka): 100049414
Entry
100049414         CDS       T02443                                 
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
  KO
K20805  E3 ubiquitin-protein ligase RNF169 [EC:2.3.2.31]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    100049414 (rnf169)
   03400 DNA repair and recombination proteins [BR:ola03400]
    100049414 (rnf169)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     100049414 (rnf169)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    100049414 (rnf169)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     100049414 (rnf169)
SSDB
Other DBs
NCBI-GeneID: 100049414
NCBI-ProteinID: XP_023817426
Position
13:84097..90439
AA seq 547 aa
MAAADPAEPPGGSVRSFSDVTPLLSGSRPGTPPPIGDSAIRAELPACPPRLTRRPPGRRR
TDPDRAGRRDGDSCREFFILPALPKSSDLLTGLTGKVKLQPADDWDEARRRNLVTCKDEC
VSGGGRDEPGVLSDSENEEPISRRIRNISVFIRKTKTSSALSSGAQRSRSCTDPMEERSR
KQRGPVLPAAVVERVGIDHSSAAGILLSSENSRSVSAPVSAPDQRPAWRAVLTFSAPVGP
TAAPAERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRLVEPTIVKSTPRNLTRGL
HKATSYEASASILQKWRQIELDRQNLKVNSKATLTSPVSDPHSSRGEDSGGGATRKLQWR
GGDGVRVSSKRRFVLEPQVGDTEPLQKQSVKIRVPAIRFSRGCSDLQPPGDAPEACSGGT
LFGRTRSFSPRSQNSGFQLCTFVPKDSQSPMKDCIQTAPRRGKKRKQKTKHLDLDLEQDV
DLRRSREASEERRQVQQERQDCTLALKLQGQLDCRLSPNAYFLRSWASTQNRRRRSLRRS
RHISKKR
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcggccgcggacccagccgaacctcccggtggttcggtccgttccttctccgacgtg
acccccctgctgtccgggagccggcccggaacccccccgccgatcggggactcagcgatc
cgcgctgagcttcccgcctgccccccgcggctgacccggagacccccgggccgcaggagg
accgaccccgacagagcgggcaggagggacggcgacagctgcagggagttcttcatctta
ccagccctgccaaagtcctcagaccttctcacaggcctgacagggaaagtcaagctgcag
ccggcagatgactgggacgaggccagaaggaggaacctcgtgacctgtaaggacgaatgt
gtctccggcggtgggagggacgaaccgggagttctgtctgactcggagaacgaggaaccc
atcagccgcaggatcaggaacatctcagtcttcataaggaaaaccaagacttcttcagcc
ctgagcagcggcgctcagagaagccgcagctgcaccgacccgatggaggagcgcagtaga
aaacagaggggtccggttctgccggcagctgtggtggagagggtgggaatcgaccacagt
tctgccgcggggatcctgctgtcttctgagaacagccggtcggtgtcggctcccgtctcg
gctccggaccagagacccgcctggcgggccgtactgacgttttccgccccggtgggcccg
accgcggcgcctgcggagcgctccgtcagccccgagagcaacgacagcatctcggaggag
ctcaaccacttcaaacccatcgtgtgttcgccgtgcacgccgcccaagcgcctgccggac
ggccgcctcgtggagcccaccatcgtcaagtccacgcctcggaacctgacccgggggctg
cacaaggccacgagttacgaggccagcgcctccatcctgcagaagtggaggcagatcgag
ctggaccggcagaacctgaaggtgaactcgaaggccacgctgaccagtcccgtctctgac
ccccacagcagcagaggggaggactcagggggcggagccacaaggaagctccagtggagg
ggcggggacggcgtgcgggtttccagcaagcggaggtttgtgttggagccgcaggtggga
gacacggagcccctccagaagcagtcagtgaagatccgggtcccagccatccgcttcagc
cgcggctgttcggacctgcaaccccctggcgacgctccggaggcctgcagcgggggcacg
ctgttcggtcggacacgctcgttctcgccgcgctcccagaactcgggcttccagctgtgc
acgtttgtgccaaaggactcacagagtcccatgaaggactgcattcagacggcccccagg
aggggcaagaagaggaagcagaaaacaaaacacctggacctggacctggagcaggacgtg
gacctgaggcggagccgcgaggcgtcggaagagcgccgccaggtccagcaggagcggcag
gactgcacgctggccctgaagctgcagggacagctggactgccggctgagccccaacgcc
tacttcctgcggtcctgggcgtccacgcagaaccgcaggaggcggagcctcaggaggtcc
cgacacatcagcaaaaaacgctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
All databases (26)   

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