KEGG   Oryzias latipes (Japanese medaka): 101155764
Entry
101155764         CDS       T02443                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101155764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ola03021]
    101155764
   03036 Chromosome and associated proteins [BR:ola03036]
    101155764
Transcription machinery [BR:ola03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101155764
   Coactivators
    SAGA/TFTC/STAGA complex
     101155764
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     101155764
SSDB
Motif
Pfam: TAF4 TAFH
Other DBs
NCBI-GeneID: 101155764
NCBI-ProteinID: XP_011473668
UniProt: H2MEG6
Position
5:25472996..25483722
AA seq 817 aa
MASTDSSAGHEPGETPDAGDRVTSLPNHSGKVGSNSAQTFNGSQTMNNHNSGSAAAVERT
ATSAPGTPAAGSGGAVLSKGLLTMPPSSGGVIQAPLLNSDGDGVAAAAQAVSQAPGHTVT
LIRQPMQTPGSSVTLNGNNSANSAAAAGSTTDQAAVGVQTNNAAPHIIKAEPPTTLLQSS
PQPVLSAPQPPSMAAGGLRAPNPQMLAPRLPQTSTGQPSVHNIQLPPGMVLVRSESGQLL
MIPQQALAQMQAQVQGGMAPRPSTPTNMPLGQPLGNTIISRQVSPSAISRQSCPAPTPLT
ASTTLHRPPILQSSVGATPMAQRTLSQPVGNTITTVTVSKETLENVKKCKNFLATLIKLA
SSGKQSSETAASVRELIKELLEGKVEAEEFTSRLYKELNSSPQPYLVPFLKRSLPALRQL
TPDSAAFIQQSQHPQAASGPVSSSSSSTVVQGSPAPRLAAPAIKPQLQPATNKPGHPTPL
LVQSQQRTVLRPQLATASTPMMAVRNQVPARIIVGQHQVQLKELQPVPLRPDGALVSKQV
FAAALTPAQRNKLKEAGGTFKDDDDINDVASMAGVNLSEESANILATNSGLVGAVTHSCK
DEAFLSCAVLQRRMLEISKRHGVTDLGTDVVTFISHATQQRLQNLLEKVSFVAQQKNINL
KESENYEQSSDVRAQLKFFEQLDQLEKQRKEEQEREILLKAAKSRARQEDPEQLRLKQKA
KEMQQQELAQMRQREANLTALAAIGPRKKRKNLDSPSSSASAEGSGTGSSLMGGAGSSSS
RPTRQRITRVNLRDLLFCLEDERFTSRSHFLYKGFLK
NT seq 2454 nt   +upstreamnt  +downstreamnt
atggccagcaccgactccagcgcgggacacgagccgggcgaaacgcccgatgccggtgac
cgtgtaacgtcgctcccgaaccactcggggaaagtcggctcaaactcggcgcagactttc
aatgggagccaaactatgaacaatcacaattcaggaagcgctgctgctgtcgagaggacg
gcgacaagtgctcccgggaccccggcggcgggcagcggcggggcagtgctgtcgaagggg
ctgctgaccatgcccccctcgtcgggcggcgtgattcaggctccgctcctgaactcggat
ggtgatggtgttgctgccgcggctcaagctgtgagtcaggctccgggacacacagtgaca
ctcatccggcagcctatgcaaaccccgggatcctctgtgactctgaatgggaacaattct
gcaaactccgctgctgctgccggcagcacaacagaccaggcagctgttggcgtccaaaca
aacaatgcagctccacacattatcaaagcagagccccccacaaccctactacagtcatcc
ccgcagcccgtcctgagcgccccgcagcccccctcaatggcagctggggggctccgggct
ccgaaccctcagatgttggctcctagactccctcagacctccacgggacagcccagtgtt
cacaacattcagcttccccctggaatggtgcttgtgcgcagtgagagtggacagctgctg
atgattcctcagcaggcccttgctcaaatgcaagcccaggtccaggggggcatggcccct
cggccatctacaccaactaatatgcctctgggccagcctctcggaaacacaatcatcagt
aggcaggtgtctccgagcgccatcagccgacaaagctgtccagccccaacgccactcact
gcttctaccactcttcacaggcctcccatcctgcagagctcagtcggggccactcctatg
gcccagaggactctcagccaaccagttgggaacaccattaccacagtaacagtgagcaaa
gaaactttggagaacgtaaagaaatgcaaaaacttcctggcaacactcatcaagctggcc
tccagtgggaaacagtcatcagagactgcagccagcgtgagagagctgatcaaagaactt
ctggagggcaaggtggaagctgaagagttcacaagcagattgtacaaagagctcaactcc
tcaccccaaccgtacctcgtgcctttcctcaagagaagcctcccagccttaaggcagctc
accccagactcggcggctttcatccagcagagtcagcatccacaggcagcctcaggtcca
gtgtcctcctcttcctccagcactgtggttcaggggagcccagccccacgcctggctgct
ccagccatcaaaccccagcttcaaccagccactaacaaaccaggacaccccaccccgctg
cttgtccagtcgcagcagagaacggtgctgaggcctcagctagccacggcgtccacccca
atgatggcggtgaggaatcaggttcctgctcgcatcattgtgggacagcatcaggtccag
ctgaaggaactgcagccagttcccttgagaccagatggggctcttgtctctaaacaagtc
ttcgctgcagccttgaccccggctcagaggaacaagctgaaggaggcggggggcactttc
aaagatgatgacgacatcaacgacgtggcttccatggctggagtaaacctctcagaggaa
agcgctaatatcttagccaccaactctgggctagttggtgcagtgacgcattcctgcaag
gatgaagctttcctgtcctgcgctgtgctgcaaaggagaatgttggagatcagtaagagg
cacggagtcacagacctgggcacagatgtagtgaccttcatctcccatgctactcagcag
cgacttcagaacctgctggaaaaagtttcttttgtggctcagcagaaaaacatcaattta
aaggagagtgagaactacgagcagagcagcgacgttcgagcgcagctgaagttcttcgag
cagctggatcagttggagaagcagcgaaaagaagagcaggagagggagatcctcttaaag
gccgctaagtctcgagctcggcaggaggatcctgagcagctgcgtctgaagcaaaaggca
aaggagatgcagcagcaggagctggctcagatgaggcagagggaggccaacctcacggct
ctggcagccatcggccccaggaagaagaggaagaacctggactctccatcctcctccgcc
tcagccgagggatccggaacaggctcctccctgatgggcggggctggatcatcaagctcc
agacccacgcggcagcgcatcacacgcgtcaatctcagggacctgctcttctgtttggaa
gacgagaggtttaccagtcgctcccattttctctacaagggctttctaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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