KEGG   Oryzias latipes (Japanese medaka): 101157222
Entry
101157222         CDS       T02443                                 
Symbol
rnf34
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X2
  KO
K20804  E3 ubiquitin-protein ligase RNF34 [EC:2.3.2.31]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101157222 (rnf34)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     101157222 (rnf34)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    101157222 (rnf34)
SSDB
Motif
Pfam: zf-C3HC4_3 ARMET_C FYVE_CARP1-2 SAP Prok-RING_4 zf-RING_5
Other DBs
NCBI-GeneID: 101157222
NCBI-ProteinID: XP_004072567
Position
9:18776455..18784288
AA seq 366 aa
MKAGASSVWASCCGILNEVMGTGAVRGQQPGFGAGAGPFRFAPSAGYSTYPPTSSGSPTL
VCKACGQAFTVFRRKHVCCDCRKSFCFLCCVLQENLRICATCHLLKATAFQRPRLMRLRV
KDLRQYLQLRNIPTDTCREKEDLVDLVLRHQGIEEEEEDDPDAASLRSRSLYTAAPSTTQ
SASELSAFAASQEEPLSRSDSSDTNQDMGDATSVSLLNLDPNEHTPEGSPQMRRRARASL
SDISSLRDIEGLSVRQLKEILARNFVNYSGCCEKWELVERVSRLYRETEENRKSLENVSS
TVTSDGEICPLTIRDDNLCRICMDATIDCVLLECGHMVTCTKCGKRMNECPICRQYVVRA
VHVFKS
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaaggcaggggcctcgtccgtgtgggcttcatgctgtggtatcttgaatgaagtcatg
ggaaccggggccgtcagaggtcagcagccagggtttggcgctggtgcggggccattcagg
tttgcccccagtgctggctactcaacgtaccctcccacgagctcaggaagccccacgctg
gtatgcaaggcctgtggtcaggccttcacagtcttcaggaggaagcatgtttgctgcgac
tgcaggaagagcttctgctttctgtgctgcgtgctgcaggagaacctgcgcatctgtgcc
acttgccatttactaaaggctaccgcctttcaacgtccacgcctcatgcgcctgcgtgtg
aaggacctgcgtcagtacctacagctgcgaaacattcccactgatacctgcagggagaag
gaagacctagtggacttggtgcttcgtcaccaaggcatcgaggaagaggaggaggacgac
cctgacgcagccagccttcgctcgcgtagcctgtacaccgcagccccctccaccacacag
tctgcctccgaactgtcagcctttgctgcctctcaggaggaacctctcagcagaagcgac
agctctgacaccaaccaggacatgggggatgccacatcagtctccctccttaacttggat
ccaaatgaacacactcctgaggggagtcctcagatgcgccgtcgtgccagagcgtccctc
tcagacatctccagtctgagagacatcgagggtctgtctgtcaggcagctcaaagagatc
ctggccagaaactttgtcaactattcagggtgctgcgagaagtgggagctggtggaacgc
gtcagcagactgtacagagagacagaggaaaacaggaaatcattggaaaatgtgagcagt
acagtaacctcagacggggaaatctgtccgctcacgattcgcgacgacaatctctgcagg
atctgcatggatgccacgatcgactgcgttctcctggaatgcggccacatggtcacttgt
acaaagtgcggcaaaaggatgaacgaatgccccatctgcaggcagtacgtagtgagggcc
gtgcatgtctttaagtcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (42)   

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