KEGG   Oryzias latipes (Japanese medaka): 101159474
Entry
101159474         CDS       T02443                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101159474 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ola03009]
    101159474 (wdr3)
Ribosome biogenesis [BR:ola03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    101159474 (wdr3)
SSDB
Motif
Pfam: WD40 Utp12 NBCH_WD40 ANAPC4_WD40 WDR54 WD40_like RMC1_N Utp21
Other DBs
NCBI-GeneID: 101159474
NCBI-ProteinID: XP_004081424
Position
21:complement(1602478..1623069)
AA seq 940 aa
MGLTKQYLRYAPSAVFGVIGSQKANIAYVTLRGGERGRYVAVAACEHVFVWDVRKGEKVL
ILQGQKHEVSFLCPSPDGVHVAVGYEDGAVRIFSLLNGESSVAFNGHKTAVTVMNYDALG
ARLVTGSKDTDVIVWDIINECGLYRLRGHKDAITQALFLKNKNLMVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWALALLKQEKRLLTGSADSELRAWDIAALEEDKTEGGPKVKKGKT
LLEEDEDDEEEKEDESLDERILSCKKAGSILREARDRVVSMTTDSRARVVACHGNDSVLE
LFTVLTEEEVQRKMTKKMKKARKKAAKAQEEAGGAAAEPVVERTLKDEIVRLTNIKASAK
IRWADCLSGAGGELKVALLLQNNTVETYSLKTSDENPSANKTARLTLGGHRTDVRTLAFS
SDNLAVLSASGDTVKVWNRSTLQVIRTMTCEYALCSLFVPGDRQIILGTKSGKLQIFELA
SGSLLETSDAHDGAVWSLCLAPDQRGIVTGGADKTVKFWEFELIKDQSSAQKRLAVKHVR
TLQLEDDVLCVRFSPDHRLLAASLLDCTVKIFHSDTLKFFLSLYGHKLPVLCLDISHDST
LIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMFLQFVPKTHLFFTAGKDRKIKQWDADK
FELVQTLEGHHREVWCLAISPNGDHLVSASHDKSLRLWERTREPIILEEEREMEREAEFE
ESVAKGDAPVVPGEVEGEAAPAAKKTVETVKAAERIMEALELHREELRKMEEHKYACEGA
GKQLPPPKPNPVLVAFGNVSPARYVLDVIKAVRSSELEVSLLVLPFPYVPELLQLFSSYI
HQGLEVELVCRCLFFLLKIHFGQITSNQMLLSVIDDLHSVTVSKVCEIRDVMGFNSAALQ
FLQRQIESQENVTFFAEATGRLEEKKKRRRKRERAVLTIA
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgggtttgaccaagcagtacctgcgctacgcgcccagcgccgtgttcggcgtcatcggc
agccagaaggccaacatcgcatacgtgactctgcgcggcggggagagggggcgctacgtg
gccgtggccgcgtgcgaacacgtcttcgtctgggatgttcggaaaggagagaaggttctg
atcctgcaggggcagaagcacgaggtgagcttcctgtgcccctcccccgatggagtccac
gtcgccgtgggttacgaggacggggcggtgaggatcttcagcctgctgaacggggaaagc
agcgtcgccttcaacggccacaaaacggccgtcaccgtcatgaactatgacgccctcggg
gcgcggctcgtcaccggctccaaggacacggacgtgatcgtgtgggacatcatcaacgag
tgcggcttataccgcctgcggggtcacaaggacgccatcacgcaggccttgtttctgaaa
aacaagaacctcatggtcacgagctccaaagacagttttgtgaagtggtgggatctggac
acacagcactgctttaagaccatggtgggccatcgcagcgaggtgtgggctttggcgctg
ctgaagcaggagaagaggctgctgacgggctcggccgacagcgagctccgagcgtgggac
atcgccgccctggaggaggataaaacggaaggaggacccaaagtgaagaagggcaaaact
ttattggaggaagatgaagatgatgaggaggaaaaagaggatgagagtcttgacgagcgc
atcttgagctgcaaaaaggccggctccatcctgagggaagcccgagacagagtggtctcc
atgacgacggactccagagccagagtggtggcctgccatggaaacgattctgtgctggag
ctcttcaccgttctgacagaggaggaagtgcagagaaaaatgaccaagaagatgaagaaa
gccagaaagaaagcagccaaagctcaggaggaggcaggaggagccgccgctgagccggtg
gtggagcggacgctgaaggacgagatcgtccggctaaccaacatcaaggcttccgctaag
atcaggtgggcggactgcctgtccggtgcaggcggcgaactgaaggtggcgctgctgctg
cagaacaacaccgtcgagacgtacagcctgaagacttcagacgaaaacccctcggccaat
aagacggctcgcctgacgctgggcggccatcgcaccgacgtgcgcacgctggccttcagc
tcggacaacctggccgtcctctctgcctccggagacacggtcaaagtgtggaacaggtcg
accctgcaggtgattcgcaccatgacctgtgagtacgctctctgctcgctctttgtgccc
ggagacagacagatcatcctgggaacgaagagcgggaagctgcagatctttgagctggcc
tcaggcagcctcctggaaacgtcggacgcccacgatggagccgtgtggtccctctgtctg
gctccagaccagagagggatcgtcaccggaggcgcagacaagacggtgaagttctgggag
ttcgagctgatcaaagaccagtcgagcgctcagaagaggctggcggtcaaacacgtccgc
actctgcagctggaggacgacgttctgtgcgtgaggttctctccggaccaccggctgctg
gcggcgtctttgctggattgcaccgtcaagatcttccacagcgacacgctgaagttcttc
ctgtcgctgtacggacacaagcttcctgttctctgtctggacatctcgcatgacagcacg
ctcatcgccaccggctccgctgacagaaacgtgaagatttgggggctggactttggcgac
tgccaccgctccctgttcgctcacgacgacagcgtcatgttcctccagtttgtgcccaag
actcatctgttcttcacggcagggaaggaccggaagatcaagcagtgggacgccgacaag
ttcgagctggtccagacgcttgagggtcaccatcgggaggtctggtgtctcgccatcagc
cccaacggagaccacctggtgtcggcgtctcatgacaagtccctgcggctgtgggagagg
acccgggagcccatcatcctggaggaggagcgggaaatggagagggaggcggagtttgag
gagagcgtggctaaaggagacgcgcccgtggttcccggagaggtggagggggaggcggcg
ccggcggcgaagaagacagtggaaacggtcaaagcggctgagcgaatcatggaggctctg
gagctccacagggaggagctcaggaagatggaggagcacaaatacgcctgtgagggcgcc
ggcaaacagctccctcctccaaagcccaaccccgtcctggtggcgtttggaaacgtctct
ccggcccgctacgttctggatgtgatcaaggcggtgagatccagtgagctggaggtttcc
ctgctggtgcttccgttcccatacgtccccgagctgctgcagcttttcagcagctacatc
caccaggggctggaggtggagctcgtctgccgctgcctgttcttccttctcaagatccat
tttggtcagatcaccagtaaccagatgctgctgtccgtcatcgacgacctgcacagcgtc
accgtgtcaaaagtctgtgagatcagagacgtgatgggcttcaacagcgccgccctgcag
ttcctccagcgccagatcgagagtcaagagaacgtgacgttctttgctgaggccacgggg
cgactggaggagaagaagaagaggaggaggaagagggagagagccgtcctgaccatcgcc
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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