KEGG   Oryzias latipes (Japanese medaka): 101165819
Entry
101165819         CDS       T02443                                 
Symbol
ring1
Name
(RefSeq) E3 ubiquitin-protein ligase RING1 isoform X2
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101165819 (ring1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101165819 (ring1)
   03036 Chromosome and associated proteins [BR:ola03036]
    101165819 (ring1)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101165819 (ring1)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101165819 (ring1)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     101165819 (ring1)
    Noncanonical PRC1 (PRC1.1)
     101165819 (ring1)
    Noncanonical PRC1 (PRC1.3/1.5)
     101165819 (ring1)
    Noncanonical PRC1 (PRC1.6)
     101165819 (ring1)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-Nse zf-C3HC4_4 zf-RING_6 zf-RING_4 zf-RING_5 zf-rbx1 zf-UDP DUF6555 TRAF3_RING zf-C4_Topoisom zf-C3HC4_5 Sina_RING zf-ANAPC11
Other DBs
NCBI-GeneID: 101165819
NCBI-ProteinID: XP_004073777
UniProt: A0A3B3HJU2
Position
11:complement(3233474..3238845)
AA seq 388 aa
MAAPINIQTPSKTWELSLYELHRTPQEVIVDGTEVAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QRSVLERLNRLHNKEALSSSIEEGLRQQARYRNHRVKKPTQESDNTTFSGGEDNGDSRSH
LSHDSAPSNAPHPRGQTPPEAGPSRKRGRASDDGSGPEADSGSPTPPLRWRKEGPASEIE
LVFRPHPQLVQAQDYNQTRYVKTTANATVDHLSKYLALRIALEDRRTDGEPEDRAREEAG
GEERGETEGASKSGEGSGLNNVSEKQYTIYIMTRGGQFSTLNGSLTLELVNEKYWKVRKP
LELYYAPTMDQQQPQPAQQKSPPPQKEG
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggcagctcccataaacattcaaactcccagtaagacatgggagctgagtctatatgag
ctgcaccgaacccctcaggaagtcattgtggacgggacggaggttgcggtgtctcctcgc
tcgctgcacagtgaactgatgtgtccgatctgcctggacatgctgaagaacacaatgacc
accaaagagtgtctgcaccgcttctgctctgattgcatcgtcacggcgctgcgttcggga
aacaaggagtgcccgacctgcaggaagaagctggtctccagacgttccctgcgcagagat
tccaacttcgacgctctgatctccaagatttacccgagccgcgacgagtacgaggcccat
cagcgcagcgtcctggagcggctcaacagactgcacaacaaggaagcgctgagctccagc
atcgaggaaggcctccgccaacaggcccgctacaggaaccaccgtgtgaagaaacccacc
caggagagtgacaacaccacttttagcggtggcgaggataatggagattctcgttcgcac
ctgtcccacgactccgccccttcaaatgctccacacccccgtggccaaacccctccagag
gccggaccgagccgcaaaagggggcgcgcctctgacgacggctccgggcccgaggcggac
agcggcagccccaccccccctttgagatggcgcaaagaaggcccggcgtccgagattgag
ctggtcttcaggccacacccacaactggtacaagcccaggattacaaccagaccagatac
gtgaagacgacggccaacgccacagtggaccacctctccaagtacctggcgctgcgcatc
gcccttgaagaccggcggactgacggggagccagaggacagagccagggaggaagcagga
ggggaggagagaggagaaaccgagggggcgtccaagagcggagagggaagcggcctgaac
aacgtcagcgagaaacagtacaccatctacatcatgacgaggggcgggcagttctctacg
ctcaacggctctctgacgctggagttggtcaacgagaagtactggaaggtcagaaagcct
ttggagctctactacgcccccaccatggaccagcagcaaccccaaccagcacagcagaag
tccccgcccccccagaaggaaggatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (19)   
   Pfam (19)   
All databases (54)   

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