KEGG   Oryzias latipes (Japanese medaka): 101165856
Entry
101165856         CDS       T02443                                 
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B
  KO
K17906  autophagy-related protein 2
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04136  Autophagy - other
ola04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101165856 (atg2b)
   04136 Autophagy - other
    101165856 (atg2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    101165856 (atg2b)
   03029 Mitochondrial biogenesis [BR:ola03029]
    101165856 (atg2b)
Membrane trafficking [BR:ola04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    101165856 (atg2b)
Mitochondrial biogenesis [BR:ola03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    101165856 (atg2b)
SSDB
Motif
Pfam: ATG2-VPS13_C Chorein_N ATG2_CAD VPS13_DH-like
Other DBs
NCBI-GeneID: 101165856
NCBI-ProteinID: XP_023807530
Position
22:complement(13113233..13130825)
AA seq 2076 aa
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDTWSLNDLL
ETADAPFEVITGFIQTISLTVPWAALLQENCALEVKGLEMVLRPRPRMASGIEPMCWSSF
MTSSMQLAKECLSQKLTDDLGESFQPFEGLEKFAETIETVLRRVRVTFVDTVLRIEHIPE
NSKTGIALEIRIGKIAYCDETGDDSSSVNVHQPTTFAHKNVQMEGITVLWDEFSDVSCSC
KPSSTPTETEPKLSPSWNPKIICEPHPQFTEPVTSTTTFQPVPVGSLSGKIELSLTLKNN
LALPGAKLDVVAHVDTLMVLLSPRQVHLLLGLFGAFSGGSAQEWAKDRKSRPMQQEDEYR
LHMELNRCLKKDTAGLGTDSDLFESQTTRTVSSRDDVFFSMADMDMSHSLSSLPPLGEPP
TVDLDLSLNSNYSPSPVESPSGKSATLWDDYMDVPRQREKQNVETSSKTQDSQLAHKITR
QTSHPSKTHGDESRPELVLKFSLSSFVVSVLHIDPLPPAHAAPSPLGPIAAYFFSVLGPD
QLSSEAFLQSRSLFNQACPLDHLRFVGQGLKIQYEHCQGSGLRTFSTDINLQHMEFVECL
FPSDSVAGGSQRGIHYTELLTFDTTASADAPCTACLHLLYKLIERRGPQGGQVRLSTIPR
KAEIQVELGAVRSELDISIVDRLNSLLQPQKLATTEMMASHMYASYNKHVSLHKAFTEVF
LDDTHTPSSCHVSLTVNAPVLGLAVRFPIPDLRSDQERGPWFKKSLQKEVLYLDLEDLEV
KIEFMGGNSPDQTKMELTFKELKGKFQEDPEEPASCFLRVSNTMDGDMTTSESGKFDWPR
VVLKMNPTAVHSILERVTAEDDEGAEDHSLEEEEEEGAAHSLKDVCDFGKPEPSPFSSRR
VMYENEEMVIPGDVVEMTEFQEKTMNNSRFVLELSFPNVQLVLPSKAFYEKLHNRINNDL
LLWEPTAPSPVETVENMPYGVGLSVASQLINTYSKDSFSQFRSAGPDAETSGSDEENLFY
SPASDLGFRSRKKKKPKSHSKTSQSLFSVVLSISHGLVSLQTSAKKEDKVVLKNKHGEFW
MEVKNAVLFSVTQYEGCKDQHYICFHTNSICMYHQGLVDGGTSASDIKLPCRTHPHWLEV
MIFQSETPAERSSTPSEGIGLEVRSMVSVAVKISSHNAERNIKEFLVAVGVSGATLQHRV
VPPGLGWYDQIVDFLNVSDEPVLGYVPPTSITTLHLHLWSCSLDYRPLHLPVRSLVMVET
FSISSSVSLDNSSSTLRIILDEAAIFLSDKCNTVSVNLARDYVQVVDMGTLELRITAVKP
VADGKLLEPRFELRCSSDVIHIRTCSDSCAALMNLIQYVASYGDLLPPAELETKHSSTTQ
RKKAEVPSRPVSQTPLLADTEQQMLQDLMSEAMEETDGQQAPGPQQNGAHEEQIHDQDPP
CSDLFLFPDESGNFTQDSSLTYPMLPSPLITPAPNLAQEADDFCILESPDSRGEDRDQEP
VVKQLTSDPVKIKDDHFRQPLEGGDPSRSALNFPIPEVRYLIKEISVIWHLYGGKDFGTL
SCTASPSRSRGSTPHSSPSQTPARHARTAGRAGGGRGRNLDVLMEIQLSKVRFQHEVYPQ
VTVASQSPVDQLASRQVFVVQDLEIRDRLATSQMNKFLYLYSSKEMPRKAHSNMLTVKAL
HTCPEAGQAPPECSLRVSLMPLRLNIDQDALFFLKDFFSSLATEVEFFSPPVQETACVTT
KNTAAPEISCSFSKHSCTSSSQEAAPIISVPAQRQTSHNGFTAFTGEEVNGAEASGSPFK
DQPIFFREFRFTCEVPIRLDYHGKHVSMDQGTFAGIVFGLTQLNCSELKLRQLCYRQGLL
GVDKLFSYALNEWLNDIKTNQLQGILSGVAPIHTLVKLAHGLRDLVWLPIEQYRKDGRIV
RGFQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDERDTKRIKRYSHYGL
AHQPVDLREGVAKAYTVVKEGLTDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAVVKP
LIMATEATSNVLGGMRNQIHPDARQEESQKWRQDEE
NT seq 6231 nt   +upstreamnt  +downstreamnt
atgccgtggccattttctgaatccattaagaagcgtgcctgcaggtaccttttgcatcgg
tatctaggcaactttctgcaggaaaagctcagcttggatcagctcagtcttgatctgtat
caagggactggatctctggcccaagttcctctggacacatggtccctgaatgatctcttg
gagacagcggatgctccttttgaggtgatcacaggatttatccaaactatttccttaacc
gtcccttgggcagcgttgttgcaggaaaactgtgctcttgaggtcaagggtttggagatg
gtgctcaggccaaggccaagaatggcatctggaattgagcccatgtgctggtccagtttc
atgacaagtagcatgcagcttgccaaagaatgcctcagtcagaaactcactgatgatttg
ggagaaagctttcagccttttgagggattggagaagtttgcagagacaatagaaacagtt
ctgagaagagtcagagtgacttttgtggatactgttctcaggatcgaacacattccagaa
aattctaaaactggaattgctctcgaaattcgaatcggcaagattgcatactgcgatgaa
acaggcgatgatagttcaagcgtaaacgtgcatcagccaaccacttttgctcataaaaat
gtgcagatggaaggaatcacagtattatgggacgagttctccgatgtgtcttgcagttgt
aaaccatcgtctactccaacggaaactgagccaaaactttctccaagttggaatccaaaa
atcatttgtgagcctcatccacagtttacagaaccagtgacttccaccaccacatttcag
cccgtgccagtcgggagcctcagcggtaaaattgagttgtccctcactctgaaaaataat
ctggctctgcctggagcgaagctggatgttgttgcccacgttgatactctgatggttctg
ctgtccccacgacaagttcatctgctccttggtttgtttggagctttttccggtggaagt
gcacaggaatgggctaaggatagaaaaagtcgccctatgcagcaagaggatgagtatcgc
ctccatatggaactgaatcggtgtctgaagaaggacacagctggactgggaacagactct
gacctctttgaaagccagacgactagaactgtgtcaagtcgagatgatgtgttcttctcc
atggctgacatggacatgtctcatagcctgtcatccctccctcctttgggtgaaccgccc
accgttgacttggacttgtcactgaacagtaactactccccttcgccagtagagtctcct
tctggaaaaagtgctactctttgggatgactacatggatgtacctcggcaaagagaaaag
cagaatgtcgagacgtcttcaaagacacaggattcacaacttgcacacaagataacaaga
caaacctctcatccatctaaaacccatggagacgagtcaaggccagagttggtgttgaag
ttttcactgagcagctttgtggtgtcagtcctccatattgaccctcttccaccggcacac
gccgctcccagcccactcggtccaatagctgcgtacttcttcagcgtgctgggcccagac
cagctttcttcagaagctttccttcagtctcgatcgctgtttaatcaggcttgccccttg
gatcatctcaggtttgttggtcagggtttaaaaatacagtatgagcactgccaagggtcc
ggcctgcggactttcagcacagacatcaatcttcaacatatggagtttgttgagtgtctg
tttccctctgattccgtcgctgggggctcacaaagaggaatccattatacagagctcctc
acatttgacaccacagccagtgctgatgctccatgtacagcttgccttcacctgctttac
aaactgattgagcgcagaggccctcagggtggccaggtgcgtctcagcaccattccaaga
aaggctgagatccaagtggagctgggcgcggtacgctctgagctagacatcagcatcgtt
gaccgccttaactcactactccaacctcaaaaactagctaccacagagatgatggcctct
catatgtatgcgtcctacaataagcacgttagtttgcacaaagccttcactgaggttttc
cttgatgacacccatacaccctccagctgtcacgtgtcactgacggtaaatgccccagtg
cttggccttgcagtgcgctttcccatccctgatctgcgttcagatcaggaaagagggccc
tggttcaaaaagtccctgcagaaggaagtactttatctggacctggaggacctggaggtt
aaaatagagttcatgggtggtaactcaccagatcaaaccaaaatggagctcacgttcaaa
gaacttaaaggcaagttccaggaggacccagaggaacctgcttcctgttttctccgagta
tccaacactatggacggagacatgacaacatctgaaagtgggaagttcgactggccaaga
gtggtgttgaagatgaaccccactgcagtccattcaatcctcgagcgtgtgacggctgag
gatgacgagggcgctgaggaccactcgcttgaggaagaagaggaggaaggggctgcccat
tcactaaaagacgtgtgtgactttgggaagccggaaccctcacccttttcttcccgaagg
gttatgtatgagaatgaagagatggtcattcccggtgatgttgtggaaatgacagagttc
caggaaaaaaccatgaacaactcgcgttttgtcctcgagttgagtttcccaaatgtgcaa
ttagtgctcccaagcaaggcattctacgaaaagctacacaacaggataaacaacgacctg
ttgctgtgggagcccactgctccgtcccccgtggaaactgtggagaacatgccctatgga
gttggactgtctgttgccagtcagctgatcaatacgtactccaaagacagctttagccag
tttcgctctgctggtcctgatgcggagaccagcggctctgatgaggaaaatctgttctac
tccccggcctctgacctggggttcagatctcggaagaagaaaaaacccaaatcccacagc
aagacttcgcagagccttttctctgtcgtcctcagcatcagtcatggtttagtgtctctt
cagactagtgctaagaaggaagataaagttgtgctaaaaaacaaacatggtgagttctgg
atggaggtgaaaaatgctgttttgttcagcgtgactcagtacgaaggctgtaaagatcaa
cactatatctgcttccacaccaacagcatttgcatgtatcaccaaggcctcgtagatgga
ggcacttctgcctcagacatcaaattgccatgcaggacacatccccattggctggaggta
atgatcttccagtcagagacgcctgcagagaggtcctcaacaccatccgaaggcattggt
ctggaagtgcgcagcatggtgtccgtggctgttaaaatctcctcgcacaatgcagagcgc
aacatcaaggagtttctagttgctgttggagttagcggagcgacgctgcagcacagggtg
gtccctcctggtctgggctggtacgatcagatcgtggactttctgaatgtctcagatgaa
cccgtcttgggttacgttcctcctacatccatcaccaccctacatttacacttgtggagc
tgctcattggattacagaccacttcacctgccagtccgatcgctggttatggttgaaaca
ttcagcatctccagcagtgtctctttggacaattcttcttctacgctgaggattattttg
gatgaagctgctatttttctctcagacaaatgcaatacagtgtctgtgaatcttgcaaga
gactatgttcaagtagtggatatgggaacactggagctcaggattacagctgtcaaaccc
gtagcagatggaaaattgctggagccaagatttgagctgcgctgctcaagtgacgtgatt
cacatcagaacctgttcggactcctgcgccgctctgatgaacctgatccagtatgtggcc
agctacggagacttgctacccccagcagaactggaaaccaagcacagcagcaccacgcaa
agaaagaaggcagaggttcccagcaggcctgtgtctcagacccctctgcttgctgacact
gagcagcagatgctccaggatctgatgagtgaagctatggaggagactgatgggcagcaa
gcaccaggaccacagcagaacggtgcccatgaggagcagattcatgaccaagacccgcct
tgctctgatctgtttctgtttcccgatgagagtggaaattttacccaagactcaagtctg
acctatccaatgctcccctctcctctcatcactcctgctcccaacttggcccaagaggcc
gatgatttctgtattctggagtctccggattccagaggagaggatcgagatcaggagccc
gtggtgaagcagctgacttctgacccggtgaaaatcaaagatgatcattttcgtcaaccc
ttagaagggggcgatcccagccgctcggctctgaattttcccattccagaggttcgctat
ttaatcaaggagatttcagttatctggcatctttacggcggaaaagactttgggactttg
tcttgcacagcctcaccttccagaagcagaggatctactcctcacagctcaccatctcaa
actccagccagacatgctaggactgcaggacgggcaggaggcggaagggggaggaacctt
gatgttctgatggagatccagctgagcaaggtgagatttcagcacgaggtctacccccaa
gtcaccgtggcatctcagagtcccgtagaccagctagcctcccgacaggtctttgtggta
caggatttagagattcgagacagactggctacctcacagatgaacaagttcctctactta
tactcgagcaaggaaatgcctcgaaaagctcattccaacatgctgacagttaaggctctt
catacatgtcctgaggccggccaggctcctccagagtgctccctgcgcgtttctctaatg
cctcttcgcctcaatatcgatcaggacgcgctattctttttgaaggacttcttcagcagt
ctcgctactgaagttgagtttttttcaccacctgttcaagaaactgcctgtgtcaccaca
aaaaacacagccgctcctgagatctcctgcagcttttccaagcacagctgcaccagcagc
agccaggaggctgcaccgatcatttcagttcctgcacagaggcaaaccagccacaatggc
ttcacggcattcaccggagaagaagtgaatggtgctgaagcctctggttctccatttaaa
gaccagccaatcttttttagggaatttcgatttacctgcgaagttcctattcggctcgac
taccatggaaagcatgtgtccatggaccaggggacatttgcaggaatcgtctttgggtta
acgcagctgaactgttctgaactgaaactgaggcagttgtgttacagacaaggactactt
ggtgtggataagctgttttcttatgcactaaatgagtggctaaatgacataaagacaaac
cagttgcaaggaatattgagtggagtggcacctattcacactttggtcaagttagctcac
ggacttagggacttggtgtggctccccatcgagcagtaccggaaggatggtcggatagtc
cgaggttttcagcgtggcactgcctcctttggaacctccacagctatggcagctctagag
ctcacaaacaggatggtgcggaccatccaggctgcagctgagacagcctatgacatggtg
tctccagtacctgatgaaagagatacaaaacggataaaacggtactcccattacggcctg
gcccatcagcctgttgacctgagagaaggtgttgccaaagcctacactgtggtgaaagag
ggtctcactgacacagcattaaccatctacgacacggccactcgggaacacgagcaacgt
ggaatgacgggagctgttggcggagttcttcgccagctgccgccagcggtcgtcaagccc
ctcatcatggccactgaagccacctctaatgtcttggggggaatgagaaaccagattcac
ccagatgctcgtcaggaagagtcacaaaaatggaggcaggatgaagaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (62)   

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