KEGG   Oryzias latipes (Japanese medaka): 101166390
Entry
101166390         CDS       T02443                                 
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    101166390 (usp30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ola01002]
    101166390 (usp30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    101166390 (usp30)
   04121 Ubiquitin system [BR:ola04121]
    101166390 (usp30)
Enzymes [BR:ola01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101166390 (usp30)
Peptidases and inhibitors [BR:ola01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   101166390 (usp30)
Membrane trafficking [BR:ola04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    101166390 (usp30)
Ubiquitin system [BR:ola04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    101166390 (usp30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700
Other DBs
NCBI-GeneID: 101166390
NCBI-ProteinID: XP_020561595
Position
9:12972627..12978722
AA seq 499 aa
MLWLRHRSCDKLVGRFLGTGSVIRNKMIKNWGVIGGIAAAVAAGVYVLWGPITVKKKRKK
GMSPGLLNLGNTCFLNALLQGLAACPSFVRWLEKFSGLPSIQSCKDNQLSTTLLQLLKAL
SSDEPGEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVITSSLEEERDRQPKVTHLFD
VQFLESFPNQDDKALTCISRAPLHPLPGSWKFQHPFHGRLTSNMSCKRCETQSPVRYDSF
ESLSLSILLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQHSSINGQLLESQRTTF
VKQLRLGKLPQCLCIHLQRLMWSNEGSPIKRQEHVQFSEYLSMDRYKHDSSTLRTQRVRC
APKTIKAESFDSIEKSMANGTEHHNNNKPFLNGTCSSMFLGSGVKNPFGLTHHDNSSAEY
LFQLVAVLVHLGDMHSGHFVTYRRSPSSSRSSSNFSSQWLWVSDDSVRKASLQEALSSNA
YMLFYERVQKPALGQQLEE
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgttgtggctcagacatagaagctgcgataagcttgttgggaggtttcttggcaccgga
tccgtaatcagaaacaaaatgatcaaaaattggggcgtcatcggggggattgcagctgct
gttgcagctggagtttatgtcttgtggggcccgattacagtgaaaaagaagagaaagaaa
ggcatgtctccgggtctgctgaatctgggaaacacctgctttttgaacgctttgctccaa
ggcctggcagcgtgtccgtccttcgtcaggtggctggagaaattttcaggtttgcctagc
attcaatcatgcaaagacaaccagctgtcgacaacgctgctgcagctactcaaagctctg
agtagcgatgaacctggagaagatgttcttgacgctggttgcctccttgatgtactcaga
ctgtatcgctggcacatcagttcttttgaagagcaggatgctcatgagctttttcatgtc
atcacatcctctctggaggaggagcgagatcgtcaacctaaggtcacacatttgtttgat
gtgcagtttcttgagagttttcctaatcaagatgacaaagctcttacctgcataagcaga
gccccccttcaccctttaccaggatcttggaagtttcaacatccttttcatggccggtta
accagcaacatgtcatgcaagcgctgtgaaacgcaaagtccagtgcggtacgactcattt
gaaagcctttctttgtccatcctgttacctcagtggggtcgcccaatctcactagatcag
tgtctgcagcactttatttcctcagaaaccatcaaagaagtggaatgtgaaaactgcaca
aagcttcagcaacattcatcgataaacgggcaacttctagaaagccagaggacgacattt
gttaaacagctgagactaggaaagctccctcagtgcctttgcatccatttacaaagactg
atgtggtccaatgaagggtctcccatcaagcgacaggagcacgtgcagttctcagagtat
ctatcaatggatcgttacaaacacgacagctccacactgaggacgcagagggtcagatgt
gctcctaaaaccatcaaagcggaaagttttgattccatagaaaagtccatggctaatggg
acagaacatcataacaacaacaaaccttttttgaatggaacctgttcttctatgtttctt
ggttctggggttaaaaatccatttggcctcactcatcacgacaacagttctgcagagtac
cttttccagctggtggctgttctggttcatctcggcgacatgcactcgggacactttgtc
acgtatcgccgcagcccctcctcctctcgcagctcttcaaacttcagctcccagtggctt
tgggtgtcggacgactcggtgcgtaaagccagcctgcaggaggcgctgtcctccaacgct
tacatgctcttctatgagagagttcaaaagcccgcactaggccaacagttggaggaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system