KEGG   Oryzias latipes (Japanese medaka): 101168475
Entry
101168475         CDS       T02443                                 
Symbol
gtf3c4
Name
(RefSeq) general transcription factor 3C polypeptide 4
  KO
K11310  general transcription factor 3C polypeptide 4 [EC:2.3.1.48]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ola03021]
    101168475 (gtf3c4)
   03036 Chromosome and associated proteins [BR:ola03036]
    101168475 (gtf3c4)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     101168475 (gtf3c4)
Transcription machinery [BR:ola03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     101168475 (gtf3c4)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    101168475 (gtf3c4)
SSDB
Motif
Pfam: TFIIIC_delta DUF5921 zf-TFIIIC
Other DBs
NCBI-GeneID: 101168475
NCBI-ProteinID: XP_004075073
UniProt: H2MAE1
Position
12:24207239..24213784
AA seq 776 aa
MAAASLPKAAKDEPQIMIKTEPEYADNHDLLTAGHVPTKRDPVVPLTSPVSGQQPLAWSP
DHRLSVCTASSLSVMEQLCDVHSNKQHLMLLRTSIPVPAEPVKMRVGPSAELAEAMKKFS
THPDLTLRQAFLTDRVIHPSVGSHKGIKYASWSPLGCDATGRCLLACLTLENRLTIHHNS
KRLEWNLLVDLTQKYGELLIERGYAKKDRPTEANLLDFEEFQRRFRMQTPVRMEWSSTYT
FKQVQPDNTCVDVEMVLLAVLMENGDLVLWKFLLPFTDGEDVLFLDLIESGVTRPSDLAW
WEYKYEDRQMSGLIIGSEEGPLKIFPVPLKSVKGYFTLRHPVILWKECDNIAVDNIRCVP
LMHPVHKASCSLIVASRGCYIFWCLLVVSTAGMNVFNSHIAGLHSLSVVSLTVDRQSMDF
YCCSMDGWIKKLTPMFQGNSLTFKQEDMPRLENLTGRRIHGIAVSPNGAYIALLSTQGFV
GKHHPINRTYQVHFVTLKSAEAATELLLKSPSQNLYKMMDLLDLVRWHVLKSSCIPMWLQ
EALDQKLQEADVPYLWRFQLFLVRVLYQTVQSPRGSNIWKPQPREAQIAEGNAEEGVREE
GEAAQTGACECGPVKQVKEEEQRATLQASIHAAEAHLLRENMKKVLGVVYLNTSVGQNTS
IPTCGLMEYLSRGVNDRASEVLIGHIKNKMNKQAFSERCALCQAVLPFTDHKDATCGNGH
LWHRCVLSYQACQTLTFRRCLLLDSIARLPEPEDPEWIKKILQAPCMLCDSPLMEN
NT seq 2331 nt   +upstreamnt  +downstreamnt
atggctgccgcctctctgcccaaagcagcaaaagatgaaccccaaattatgatcaaaact
gaaccagaatacgcggataatcatgatttactcactgctgggcacgtcccaactaagcga
gacccggtagtccctctgacgtcgccggtaagtgggcagcagcccctcgcctggtcgccg
gatcaccgcctgtcagtgtgtaccgccagttccctgtcggtgatggagcagctgtgtgat
gttcacagcaacaaacagcatctgatgctgctccggacgtccatccctgtcccggccgag
ccagtcaaaatgcgggtgggaccatcagcagagctggctgaagcgatgaagaagttctcc
actcaccctgacctcacactgaggcaggcatttctgaccgacagagtgatccatccgtcg
gttggctcccacaaaggaataaagtatgcaagttggtcgcctttaggttgtgacgccacc
ggacgctgtctccttgcttgtttaacacttgaaaacaggcttaccatccatcataacagt
aagcgcctagagtggaacttgctggtcgatctcacccaaaagtacggtgagctgctgata
gagcgaggctacgccaagaaagacaggccgaccgaggccaacctgttggactttgaggag
tttcagcggcgtttccgcatgcagacgcctgtgaggatggagtggtcaagcacgtacacg
ttcaagcaggttcaaccggataacacctgcgtggatgtggagatggtcctcctcgccgtg
ttgatggaaaacggtgaccttgttttgtggaaattcttgctgccctttacggatggcgag
gatgtgttgtttttggacctcattgagtccggcgtgacgcggcccagtgacttggcgtgg
tgggagtacaaatatgaggatcgtcagatgagcggactgatcattggcagcgaggaaggg
cctcttaagatctttcccgtcccccttaaaagcgtgaaaggctacttcaccctcagacac
ccagtcatcctgtggaaagaatgtgacaatatcgcagttgacaacatccggtgcgttccg
ctgatgcatccggtccataaagctagctgcagcctgatcgtggcgtctcgaggctgctac
attttctggtgtttgcttgtggtttcaaccgccgggatgaatgtgttcaactctcacata
gcaggactccactcgctctctgtggtgtctctgacggtcgatcgacagagcatggacttc
tactgctgttccatggatggctggattaaaaaactgaccccgatgtttcaggggaactct
ctgacgttcaagcaggaagacatgccgcgacttgagaacctcaccggcagacggatccac
gggatagcggtgagccccaacggagcatacattgctcttcttagcacccagggtttcgtt
ggtaaacatcaccccatcaacaggacttaccaggtccactttgtgactctgaaatcagca
gaggctgctacagagctgctgttaaagtccccctctcagaacttgtataaaatgatggac
ctgctggacttggtgaggtggcacgttctcaaaagcagttgcattcccatgtggctgcaa
gaggcgctggatcagaaactccaggaggcagatgtaccctacttgtggcgcttccagctc
ttcttggtacgtgtattgtaccagacggtacaatctcctcgtggcagtaatatctggaaa
cctcaacccagggaagcccagatcgctgaaggaaatgcggaggaaggcgtcagagaagag
ggtgaggctgcgcaaacaggagcatgtgagtgtggaccagtcaaacaggtgaaggaggag
gagcagagggctacgctgcaggccagcatccacgcagccgaggcccacctgttgagggag
aatatgaagaaagtgttgggggtggtgtacctcaacacctccgtcggacaaaacaccagc
atccccacctgcggcctgatggagtatctttctagaggtgtgaacgaccgagcgtcagag
gtgctgatcggccacatcaagaataaaatgaataagcaggcgttctctgagcgctgcgcc
ctctgtcaggccgtgctgcccttcaccgaccacaaagacgccacgtgtggaaatggacac
ttgtggcacaggtgtgtgttgtcataccaggcctgccaaacgctgacgttcagacgctgc
ctcctgctggatagcatcgccagactgccagagcctgaggatccagagtggataaagaag
atcctgcaggcgccctgcatgctctgtgattcaccgctgatggagaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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