KEGG   Oryzias latipes (Japanese medaka): 101169924
Entry
101169924         CDS       T02443                                 
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
  KO
K22647  ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:3.4.19.12]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101169924 (mindy4)
Enzymes [BR:ola01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101169924 (mindy4)
Ubiquitin system [BR:ola04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MINDY
    101169924 (mindy4)
SSDB
Motif
Pfam: MINDY-3_4_CD
Other DBs
NCBI-GeneID: 101169924
NCBI-ProteinID: XP_011472163
UniProt: A0A3B3IC37
Position
4:complement(8615468..8624407)
AA seq 671 aa
MIAFVEEVSSSLVREFLSRKGLKKTIACMDEEHPRTATSINNRSLLRQVLNIEDLYRRNK
VQNPPLKTVLEIIVKHHMEQQKKVKIMTGDGETARTVTPPAFTAGSPLICDTEENSSRSE
IKATHSSPSTFLSLLSDENKSSGHDQKDVSAYDSERQKCQPLTSLQQEWESSAQKEPEKK
SEAISRSRTNRNRRGMMSGPIPREMGRKKPSPRYDAAQPLFRRDGENQHSDDAHLDINTH
SCAGRKPGLQRSPESLQSENNNRGNKAKAVNKNHMPNNSDLNVSDLVLDDVDDEDLQEIS
QVSVQRSVSECLPKSRPIDQSIAMDLKAVLLGSSLNCFSAEWRNQGLTFSDTHDLRYGIV
QRKGGPCGVLASIQAFILKKLLFENTESSDSDLQRLRPSNATRRKCLVLALAEVLWKAGE
EERATVAVNTGLNHFTPSGRYRSEGVLEKMVLFTVDNLRDLQILVEQHIEQFETGTLGCI
LLTISAVLSRSIEKVKEDMDVSSSTLIGAHGYCTQELVSLLLCGRAVSNVFDDDMELDSG
GGDTTLLKGIKSRCDVGLLSLFEHYNICKVGAHLKTPSYPIWVVCSESHFSVLFGLQREL
LTSKDQHLEFDLYYYDGLANQQEEIRLTVTVGKWRRSFQEVDSDSIPPLELCIRTRWKDV
EINWNDTEPIL
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgatcgcttttgttgaagaggtttcttcttcactcgtgcgggagtttctgagccggaag
ggcctgaagaagactattgcctgcatggatgaagagcatccacgaacagcgaccagcatc
aataacagatcactgttgagacaagtgctcaacatcgaagatctgtacagaagaaataag
gttcaaaatcctcctctgaagacagtactggagattatagtgaaacatcacatggagcag
cagaaaaaagtcaagatcatgacaggagacggtgaaactgcccggaccgttaccccacct
gcttttactgcaggatcacctttgatatgtgacacagaagaaaacagcagcaggtctgag
ataaaagcaacacactcctctccgtctacatttctatcactgctgtcagatgaaaacaaa
tcatccgggcatgatcaaaaagatgtctcggcttatgattcagaacgtcagaaatgccag
ccactgacttccctgcaacaagaatgggagagctctgcccagaaggagccagagaaaaaa
agtgaagccatctcaaggagcagaactaaccgcaacagacgaggcatgatgtctggacca
ataccacgggaaatgggcaggaaaaaaccaagtccaaggtacgatgcggcccaaccgctt
ttcagaagggatggagaaaaccagcattctgatgatgcacacttggatatcaacacacac
agctgtgcagggcggaaacctgggctgcaaaggtctccagaaagcctgcagagtgaaaac
aacaacagaggaaacaaagcaaaagcagtgaacaaaaaccacatgccaaacaattctgat
ctgaatgtgtccgacttggttttagatgatgtagacgacgaggatctgcaggaaatctcc
caagtatctgtgcagaggtccgtgtcggagtgtctccctaaaagccgcccgattgaccag
agcatagccatggatttaaaagcagttcttctgggctccagcttgaattgtttcagcgca
gagtggagaaatcagggtctgaccttctcagacacgcatgacctcagatacgggatcgtg
cagagaaagggtggtccttgtggagtcctagcatctattcaagccttcatcttaaagaaa
cttctttttgagaacactgagagcagtgattctgacctgcagcggttaagaccttccaac
gcgaccaggagaaagtgtcttgttttagctttggcagaagttctgtggaaggctggtgag
gaggaacgagcgacagtcgccgtaaatacggggctgaatcatttcacaccaagtgggcgc
tacaggtctgaaggagtacttgaaaagatggtgctcttcactgtggacaacctcagggat
ctgcagattcttgtggagcagcacatcgagcagtttgaaactggaacgctgggatgtatc
ttgctgaccatatcggctgttctgtcccgatccattgaaaaagtcaaagaggacatggac
gtgtccagctccacgctcatcggtgctcatggctactgcactcaggagctggtcagcctg
ctgctctgcggcagagccgtgtccaacgttttcgatgacgacatggagctggactcaggc
ggcggcgacaccacgctcctcaaaggaatcaagagccgctgtgatgtgggcctgctgtct
ctctttgaacattataacatctgtaaggtgggagctcacctgaagaccccttcttacccc
atctgggtggtgtgcagtgaaagtcacttcagcgtgctgtttggcctgcagagggagctg
ctgacctccaaggaccaacacctggagtttgatctctactattatgatggactggccaat
cagcaggaggagatccgcctcaccgtcacggttggtaagtggcgccgcagctttcaagaa
gtagacagtgactccattcctcctctggagctttgtattcgcacgaggtggaaagatgtg
gaaatcaactggaatgacactgaaccgattctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system