KEGG   Oryzias latipes (Japanese medaka): 101169926
Entry
101169926         CDS       T02443                                 
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101169926 (rexo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ola03009]
    101169926 (rexo1)
Ribosome biogenesis [BR:ola03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    101169926 (rexo1)
SSDB
Motif
Pfam: EloA-BP1
Other DBs
NCBI-GeneID: 101169926
NCBI-ProteinID: XP_011472361
Position
4:complement(14762295..14775996)
AA seq 1235 aa
MLRSTGFFQGIDCPFYTENSDGRSGFSGCNRPYCHFRHRQQQRRTSYGALADVKKQRNRH
FGQKEQGYDPFNPEVSRPQQQENGEDAESGDITGALEMVNRAIEEVRSQVEREKRKLFQI
EDEPYNPNKGAGPSRSNAAKRKAAGSHLAYDPGSYQISSEGFKPTPGCSKYTLDSDSPVV
NSNSMEYVPTSLKKPPAQIPSSPPSPKYANSTPSSKCKYTVDSSRPSTDMEYDPLSNYSA
GIAVKSKRDSVTQLVSTSCGKTFKLPGTDLLDEGYFIDGKKQCQPSINANKYTISDSDGE
SSGTEYRPTSLSNLQQRKCITFGKDMPEGVQVQGKTDERTLDSDIQGWDKTKNHLEKKKV
ADGSRQDKKPEKVHRLEKDINKSASRSFGSSSKDSGSAKGLKNQNKSHGKKDFGKSTSKD
KRSDKVQREGRDEKKNDGKVRTVEKLKRDASKDHKDARESKKLKTSEREKEHSRQKDSQQ
KNGKLSSIKRVKDTKKTSKSSSSSSKGISSVSNDKMKRSLTLSHEKRLEVKKQNLSLSHA
DLFGDESPEEAEPILVDSGDESEEILVRKSADALKRVRLNKRKVSEWTQSSSDNESDHNE
ECKEEEADSIDLSYFQDDLDLDSDPMEECLRIFNESKDVKREDKGRQAKQPSRDSEEDKS
TDCTLATLLPGQKKRVSHLAAKGNVDPPAKTAIRSYKRPTPQEACFQRMQIAQQQAAQLS
ASVKAAAAQSSSIGFSGEKKRIAHRPNPSSPKTRAGPADVKATASRVLSPSQTLQGVKTQ
TTAGILSKTSSTATHKRVAHTPTMKSSSLKRPVIPSEFGAKVPTNIRQRYLNAFIDECIK
FCSSEEDAFQIALDEEKVVYERSSSKNIYLNVAVNTLKKLRGKSSCGPTSASKVSGLGAK
RRAQSHEEVLGGRLAATTSFTVNRSGKQQEEKLTGATLYRKLKAYLLTEEQLQEHGYPRA
NPEAPGRAVLYNLPEKKAVVDPFTKICCRCGAEYKVNVNGSCVRREECSYHWGRLRRQKV
SGGWETSYSCCTATVGAAGCQIGKQHVQDARKESLDGFVSTFSKSLSPEKNGGVFALDCE
MCYTKQGLELTRVTVIDSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTTITLRDVQ
AVLLCMFSSESILIGHSLESDLLALKLIHSSVVDTSVVFPHRLGLPYKRALKNLMADHLK
RIIQDNVDGHDSSEDASACMELMFWKIKEDAKVKR
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgttaaggtccaccggctttttccaagggattgactgcccgttttacacggaaaacagc
gatggcaggagcggcttcagtgggtgtaacagaccgtactgtcacttcaggcacagacag
cagcaaagacggacgtcctatggagcattggccgatgttaaaaagcaaagaaaccgtcac
ttcggacaaaaagaacaaggatacgatcccttcaacccagaagtaagcagaccgcagcag
caggagaatggcgaggatgctgaatcaggtgacatcaccggcgccttggagatggttaac
cgagccatcgaggaggtccgcagccaggtggagagagagaagaggaaactctttcagatt
gaggatgaaccgtacaatcccaacaagggagctggcccatccagatccaatgctgcaaaa
aggaaagcggcaggctcacacttggcttacgatcccgggagttatcagatctcctcagag
ggattcaagcccactcctggttgcagcaagtacaccttggattcagacagtccggtggtc
aacagtaactcaatggaatatgttcccacttctttaaaaaagcctccagcacaaatccct
tcttctcccccaagtccaaagtatgcaaacagtacaccttcttctaagtgtaaatacact
gtcgacagctctagaccgtctacagacatggagtacgacccgctgtctaactactcagcc
ggaatcgcagtcaaaagcaagagggattccgtcacgcagcttgttagtaccagctgtggc
aagacatttaaactcccaggaacagatttgctggatgaggggtattttattgacgggaaa
aagcagtgtcagcccagcatcaatgcaaacaagtatactatctctgactctgatggggag
agctcaggaacagaatacagacccacctcactcagcaatctgcagcaaagaaaatgcatc
acttttggaaaagacatgcctgaaggtgttcaggtgcagggcaagacagatgaacggacc
ctcgactctgacattcagggatgggacaaaaccaaaaaccatctggagaagaagaaggtg
gctgatggaagcaggcaagacaaaaagcctgagaaagtgcatagacttgaaaaagacata
aacaaatcagccagcaggagttttggcagcagtagtaaagacagtggctcagcgaagggc
ttaaagaatcaaaacaagagtcacggaaaaaaggacttcgggaagagcacgtcaaaggat
aaaagatcagataaagttcagagagaaggcagagatgaaaagaaaaatgacgggaaggtc
aggactgtggaaaagcttaaaagagatgcaagcaaagaccacaaagatgcaagagaaagc
aaaaaactgaagacctcagagagagaaaaagaacacagcaggcaaaaggacagccaacag
aaaaacggtaaacttagcagcattaaaagagtcaaagatacaaagaaaaccagtaaaagc
agttccagcagcagcaaagggatttcatctgtcagcaatgacaaaatgaagcgaagcctc
actttatcacatgaaaaaagactggaagtcaaaaagcagaatctgagtctgagccacgca
gatctgtttggagacgagagtccagaagaggcggaaccgattctggtggattccggggat
gagtccgaggaaatcctggtacggaagtcagccgatgcgttaaaaagagtccgtctcaac
aagaggaaagtctccgagtggactcaatcctcctctgacaatgagagtgatcacaatgaa
gaatgcaaggaggaagaggccgacagcatcgacctttcctacttccaagatgatctggat
ttggactctgatcccatggaggagtgcttgaggatctttaatgaatctaaagatgtgaag
agggaagacaagggaaggcaagcaaagcagccttccagggattcagaggaggataaaagc
acagattgcactttagcaactctccttcccggccagaagaagagggtgtcccatttagct
gccaaaggaaacgttgatccacctgcaaagacagcgatccgctcgtataaaagaccaaca
ccccaggaggcgtgcttccagcgaatgcagatagcacaacaacaagccgctcagctctcc
gcttctgtcaaagccgccgccgcgcaaagctccagcatcggcttttctggagagaagaaa
agaatcgcccaccgtcccaacccttcatcgcctaagacaagagcaggacctgcagatgtt
aaagcaactgccagtcgagtattatctcccagtcagaccctgcagggtgtcaagacccaa
accactgctgggattctgtccaagacctcctctacagccacgcataagagggtggcgcac
acacccaccatgaagagctcttcattgaagcgacccgtgattccctctgaatttggtgcc
aaagttcccaccaacatacgccagcgctacctcaatgctttcatagatgaatgcatcaag
ttttgctcatcagaggaggacgcctttcagatagccctggatgaggagaaggtggtgtat
gagcgcagcagcagtaagaacatctaccttaacgtggccgtcaacacgctgaaaaagctt
cggggcaaaagcagctgtggcccaacatctgcctccaaggtgtctgggttgggagctaaa
aggagagcacagtcccatgaggaggttctgggaggccggctggcagccacaaccagcttc
actgtcaacaggtcgggtaaacagcaggaggagaaacttaccggagctactctgtacagg
aagctgaaggcgtacctgctgacggaggagcagcttcaggagcacggctatcccagagca
aacccggaggctccaggcagggccgtcctttacaacctcccagagaaaaaggccgttgta
gacccattcaccaagatttgctgccgctgtggtgcagaatataaggtcaacgtgaacggt
agctgtgtgaggagagaggagtgcagctatcactggggacgtttacgcagacagaaagtc
tctggaggctgggagacgagctacagctgctgcactgcaactgtgggagcggcaggatgt
cagattggcaagcaacatgttcaggatgcgcgtaaagagtcgctggatggctttgtgtca
acgttcagcaaatcgctatcaccagaaaaaaatggaggggtgttcgctttggactgcgag
atgtgttataccaaacagggtctggagctgaccagggtgacggtcatcgactctgagctg
aaagtcgtctacgatacgtttgttaaaccagacagcaaagtggtcgactacaacacacgg
ttttcaggagtgacagaggaagacttggagaacaccaccatcacgctgagagatgttcag
gccgttctgctctgtatgttcagctcagagtccatcctcatcggacacagtctggagagt
gacctcctcgctctgaagctcatccacagctctgtcgtggacacctctgtagtgtttcct
caccgccttggtttgccctacaaacgcgccctgaagaacttgatggctgatcatctcaaa
cgcatcattcaggataacgtggatggccatgactccagtgaggacgcctcggcctgcatg
gagctgatgttctggaagattaaagaagatgcaaaggtcaaaagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (69)   

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