KEGG   Oryzias latipes (Japanese medaka): 101174081
Entry
101174081         CDS       T02443                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101174081 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101174081 (thoc6)
   03041 Spliceosome [BR:ola03041]
    101174081 (thoc6)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101174081 (thoc6)
Spliceosome [BR:ola03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101174081 (thoc6)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 101174081
NCBI-ProteinID: XP_023812950
Position
8:complement(284650..292443)
AA seq 364 aa
MPCVPVTSYSRARGFRALCAARFIVWKFSVVRFWGFQVGGRMGPVELLHMSVFSQSFSPC
GRFLAAGNNYGEIGLFSLSAALSPDAGAASLKPVLTFTAHEGPVFSLLSADGVLLSAGNG
EVSAWSWTELSKKSVKPLWSKRPTYSSSLEIPEINAMAFNPRDNSLALGGGDNNIHVLDL
EHGVFKAVLHGHTDYVHCLCMREREAELLSGGEDGVVRMWDSRTGRCVHCLEVHKYEVCA
RPQHGKWISCLTTDSDWMVCGGGPALSLWHLRSLSPTSVFPLSGCQRHAAFHQDTILAVG
EGQFVSHCLLGGAVKAQIPCTPQSLNTLQINTGSTEHRVLTVGGSSSCIDVFTNPSYRAF
SLSF
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgccgtgcgttcctgtgacgtcatattctcgagccagaggttttcgcgccttgtgcgcc
gctaggtttattgtctggaagttcagtgttgttcggttctgggggttccaggtcggcggc
aggatgggaccggtcgagctgctccacatgtccgtcttctctcagagcttctctccctgc
ggacgcttcctggcggccgggaacaactacggggagatcggcctgttcagtttgtcagca
gctctcagcccagatgccggtgccgccagcctcaaaccggtcctgacattcacagctcac
gagggtccagtcttcagccttctgtcggcggacggcgtcctgctgagtgctggaaacggc
gaggtcagcgcctggagctggaccgagctcagcaagaagagcgtaaagcccctgtggagc
aagagacccacttacagctccagtctggagatcccagagatcaacgccatggcgttcaac
ccacgggacaacagtctggcgctggggggcggagacaacaacattcacgtcttggacctg
gaacatggcgtctttaaggcggtccttcacggacacacggattacgtgcactgcttgtgc
atgagagagcgggaggcggagcttctgtcgggtggagaggacggagtggtgaggatgtgg
gacagcaggaccgggcggtgcgttcactgcctggaggtccacaagtacgaggtgtgcgca
cggccccagcacggaaaatggatcagctgcctgaccaccgactctgactggatggtgtgc
ggggggggcccagctctgtccctttggcacctccgctcgctgtcacccacctccgtcttc
ccgctgagcggctgccagcgccacgccgccttccaccaggacacgatcctggcggtgggg
gaggggcagtttgtgtctcactgtctgctggggggggcagtgaaagcgcagatcccgtgc
acgccgcagagcctgaacacgctgcagatcaacacgggcagcacggagcacagggtgctg
acagtgggggggagtagcagctgcatcgacgtcttcacaaacccgtcctacagagccttc
tccctcagcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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