KEGG   Oryzias latipes (Japanese medaka): 101174874
Entry
101174874         CDS       T02443                                 
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03022  Basal transcription factors
ola03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101174874 (mnat1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101174874 (mnat1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ola03021]
    101174874 (mnat1)
   03400 DNA repair and recombination proteins [BR:ola03400]
    101174874 (mnat1)
Transcription machinery [BR:ola03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101174874 (mnat1)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101174874 (mnat1)
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-RING_UBOX zf-C3HC4 zf-UDP TRAF6_Z2 TRAF3_RING zf-RING_2 zf-P11
Other DBs
NCBI-GeneID: 101174874
NCBI-ProteinID: XP_004082327
UniProt: A0A3B3I967 A0A3P9HJA2
Position
22:complement(12020217..12059479)
AA seq 311 aa
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGAGNCVQCNTPLRKNNFRV
QLFEDPTVDKEVEIRKKVMKIYNKRECDFQSLREYNDYLEQVEDIVYNLTNNVEVESTKL
RMEQYQRENKDVIQRNKAKLTREQEELEELLLLEQQSSEQRRLDVLQEEQRQLQAKRKNK
QALLDELEKSKLPATLLLAQHKVRAAQLETEIEQQKQNVKPTSLFSTGIQMNQTVSLQPL
PRIEEALYHYKPLQVETYGPSVPELEQLGRFGYLNHVRTALPQDTAGGYTSALACYRAIQ
DAFSGLFPPKF
NT seq 936 nt   +upstreamnt  +downstreamnt
atggacgaccagggttgtccgagatgcaaaacaacaaaatacaggaatccttcgctgaag
ctgatggtgaacgtctgcggtcacacgctatgtgagaactgtgtggagatgctgtttgtg
cgcggcgccggcaactgtgtacaatgcaacacgccgctgaggaagaacaactttcgggtg
cagctcttcgaggatccgacagttgacaaggaggtggaaattcgaaagaaggtcatgaaa
atctacaacaagagggagtgtgacttccaaagcctcagagaatacaacgattatctggag
caagtggaggacatagtgtacaacctgacaaacaacgttgaagtggaaagcaccaaactg
aggatggagcaataccagagggaaaacaaagatgtcatccagcggaataaagcaaagctt
acacgagagcaggaagagctggaggagctgctgctgctggaacagcaaagcagtgaacag
cggagactggatgtgctgcaggaggagcagagacagctgcaggccaagagaaaaaacaaa
caggctcttctggatgaactggaaaagtctaagcttcctgccactcttttactcgctcag
cacaaagtccgtgctgctcagctggagactgaaatagagcagcagaagcaaaatgtaaag
cctacaagtttgttctctactggaattcaaatgaaccagactgtgtctctgcagcctttg
cctaggatagaggaagctctctaccactacaaacctcttcaagttgagacctacggaccc
tctgtgcctgaactggagcagctgggaagatttgggtatctgaaccacgtgcggaccgcc
ctcccccaggatacagccggaggatacacctctgctttagcatgttatcgagccattcag
gatgcattcagtgggctcttccccccaaaattctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (40)   

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