KEGG   Oryzias latipes (Japanese medaka): 101175170
Entry
101175170         CDS       T02443                                 
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
  KO
K05208  glutamate receptor ionotropic, NMDA 1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04020  Calcium signaling pathway
ola04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    101175170
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    101175170
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ola04040]
    101175170
Ion channels [BR:ola04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   101175170
SSDB
Motif
Pfam: Lig_chan ANF_receptor Lig_chan-Glu_bd SBP_bac_3 Ion_trans_2 Peripla_BP_6 DUF6724 SIP Cas_APE2256
Other DBs
NCBI-GeneID: 101175170
NCBI-ProteinID: XP_011477897
UniProt: A0A3P9MJ52 A0A3B3H6I4
Position
9:27190085..27277821
AA seq 939 aa
MELRSVLLLAVLHCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFNQDTNLTALLLEARDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMNGKALNEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPGRVVQVGIFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKSDGTCKEEYTVNGVLIKKVICTGPNGTTPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPEPKTSFR
SITSTSDLKRRMAPGDATPYPTDITGQLNLSDPSVSTVV
NT seq 2820 nt   +upstreamnt  +downstreamnt
atggagttgcgcagcgtgctcctgctggcggtgctgcactgctgctcggtggcgctgtgc
ggctgcgagccccgcctggtcaacgtcggcgccgtcctgagtcagaagcgctatgagcag
gtgttcaaggaggcggtgagtcaggccaacgcgctctacggcaaggacaagttcaagatg
aacgccatctctgtcacacacaaacccaacgccattcagatggcgctgtccgtctgcgag
gacctgatctccaaccaggtatacgcaatcctggttagccatcctcctcagtccaacgat
catctgactccaacgcctgtctcctatacagccggcttctaccgcattcctgtggttggc
ctaacgactcgcatgtccatctactcagacaagagcatccacctgtcgttcctgaggacg
gtgcccccgtactcacaccaggctcaggtgtggttcgacctcatgagagagttcaggtgg
aaccacatcatcctgatagtcagcgacgaccacgagggccgagccgcccagaaaaagctt
gagacgctgcttgaagagcgcgagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggcagagaaagttctgctgttcaaccag
gacaccaacctgacagcactactgctggaagccagagacctggaggccagagttatcatc
ctctcagcaagtgaggacgaggctgcagccgtctacaaggcagcccggcagctcaacatg
accggctctggttacgtgtggctggtcggggagagggagatgaacggcaaagctctgaac
gaagctccagacggcctgctgggcctccaactgatcaacggtaagaacgagtcggctcat
attgcggacgccgtcgccgtggttgctcagtctctgcaggaattgtttgagaaagagaac
atcacagagcccccgcgaggatgcgtaggaaacaccaatatctggagaaccggcccgctt
ttcaaaagagtgctgatgtcatcaaagtaccctgatggcttgacgggccgaattgagttt
aatgacgatggagaccggcgctttgctacctatagcatcctgaattatcagcagaaacca
ggccgtgttgtccaggtcggaatcttcaacggaactcaggttgtgatgaatcctcagagg
aagatcatctggcctggaggagaaaccgagaaaccagtgggataccagatgtcaaccaaa
ctgaagattgtgaccatccaccaggaaccttttgtttatgtgaagccaacaaagagtgac
ggaacgtgcaaagaagaatacacggttaatggagtcctgataaagaaagtgatctgtact
ggacccaatgggaccacaccaggtcaacccatcgtccctcagtgctgttatggcttctgc
attgacctgctcatcaagctggctatgagcatgaacttcacctatgaggtacacctggtg
gctgatgggaagtttgggacgcaggagcgggtaaacaacagcaacaagaaggagtggaac
gggatgatgggggagctgctgggggggctagccgacatgattgtggccccccttaccatc
aacaacgagcgcgctcaatacattgagttctccaagcccttcaaataccaggggctcacc
atcctcgtcaagaaggaaatccctcgcagcactctggactcgttcatgcagcctttccag
agcacactgtggcttttagtcggtctgtcggtccatgtggtggcagtgatgctttaccta
ctagaccggttcagcccgtttggaaggttcaaagtgaacagtgaagaagaagaggaagac
gccctcaccttgtcctcggccatgtggttctcttggggagttttgctgaactctgggatc
ggagaaggagctcccaggagcttctcagctaggatcctggggatggtgtgggcgggtttc
gccatgatcatcgtagcatcatatactgccaatttggcagccttcctggtgctggaccgg
cctgaggagcgcatcactggcatcaatgaccccaggctgcgtaacccatcagataagttc
atctatgccacagtgaagcagagctcggtggatatttacttcagacggcaggtggaactg
agcaccatgtaccggcacatggagaaacacaactatgagagcgccgctgaggccatccag
gctgtccgagacaacaagcttcacgccttcatctgggacagtgctgtgttggagtttgag
gcttcacaaaagtgcgatctggttacaacaggagagcttttcttccgctcaggctttggg
attggaatgaggaaagacagtccatggaaacagaacgtttctctggccattctcagttca
catgaaaatggcttcatggaggatctggacaagacttgggtacgataccaggagtgcgac
tccaggagtaatgctcctgcaactctcaccttcgagaacatggcgggcgtgttcatgctg
gtcgccggcggcatcgtggcggggatcttcctcattttcatcgagatcgcttacaaacgt
cacaaagacgcccgcaggaaacagatgcagctggccttcgccgccgtgaacgtgtggagg
aagaacctgcaggataggaaaagtggtagagcagagcccgagcccaaaacctcttttagg
tccatcacttcgacctccgacctcaaacgccgtatggcccccggggacgccacgccgtac
ccgactgacatcaccggccagctcaacctatcagatccgtccgtcagcaccgtggtctga

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