KEGG T02443: 110013676

Oryzias latipes (Japanese medaka): 110013676

Entry

110013676         CDS       T02443

Name

(RefSeq) oocyte zinc finger protein XlCOF22-like

K09191

general transcription factor IIIA

Organism

ola Oryzias latipes (Japanese medaka)

Brite

KEGG Orthology (KO) [BR:ola00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    110013676
   03021 Transcription machinery [BR:ola03021]
    110013676
Transcription factors [BR:ola03000]
Eukaryotic type
  Zinc finger
   Cys2His2 others
    110013676
Transcription machinery [BR:ola03021]
Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIA
     110013676

SSDB

Motif

Pfam:

zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-C2HE zf-C2H2_6 zf-met zf-C2H2_2 zf-LYAR zf-H2C2_5 zf-C2H2_8

Other DBs

NCBI-GeneID:

110013676

NCBI-ProteinID:

XP_020555803

Position

2:complement(5683013..5685647)

AA seq 295 aa
MSFSYLSQLKTNMRHTGEKPFSCIECDKSFSQTSHLKSHMRSHTGENPFSCVECDKRFSH
VFTLKKHMRTHTGEKLFSCIECDKRFSHVFTLKKHMRTHTGEKPFSCVECDKRFSDSSSL
QKSLRTHTGEKPFSCKKCNKSFSFVFNLKTHMRTHTGEKPFSCKECDKSFSEKSKLKIHM
RTHTGEKPFSCKECDKSFSEKSKLKIHMRTHTGEKPFSCTECDKRFSQLSNLKNHIRTHT
GEKPFSCTECDKRFSEMSSLKKHMRTHTGEKPFSCKVCKKKFNQTSSLKTHMKTH

NT seq 888 nt +upstreamnt +downstreamnt
atgagttttagttatttatctcagctcaaaacaaacatgagacacacaggagagaagcct
ttttcttgtatagaatgtgacaaaagttttagtcaaacatctcatcttaaatcacacatg
agatctcatacaggagagaacccattttcttgtgtagaatgtgataaacgttttagtcat
gtgtttactctcaaaaaacacatgagaactcacacaggagaaaagcttttttcttgtata
gaatgtgataaacgttttagtcatgtgtttactctcaaaaaacacatgagaactcacaca
ggagaaaagcctttttcttgtgtagaatgcgataaacgttttagtgattcatctagtctc
caaaaaagcttgagaactcatacaggagagaagcctttttcttgtaaaaaatgtaataaa
agttttagttttgtatttaatctcaaaacacacatgagaactcacacaggagagaagcct
ttttcatgtaaagaatgtgataaaagttttagtgaaaaatcaaaactcaaaatacacatg
agaactcacacaggagagaagcctttttcatgtaaagaatgtgataaaagttttagtgaa
aaatcaaaactcaaaatacacatgagaactcatacgggagaaaagcctttttcttgtaca
gaatgtgataaacgttttagtcaattatctaatctcaaaaaccacataagaactcataca
ggagaaaagcctttttcttgtacagaatgtgataaacgttttagtgaaatgtctagtctc
aaaaaacacatgagaactcacacaggagaaaagccattttcttgtaaagtatgtaaaaaa
aaatttaaccaaacatccagtctcaagacacacatgaaaacacattaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (113)   
   KEGG ORTHOLOGY (1)   
   RefGene (109)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (130)   

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