KEGG   Olivibacter sp. LS-1: FKG96_16505
Entry
FKG96_16505       CDS       T06195                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
oli  Olivibacter sp. LS-1
Brite
KEGG Orthology (KO) [BR:oli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oli03400]
    FKG96_16505
DNA repair and recombination proteins [BR:oli03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FKG96_16505
    Archaeal homologous recombinant proteins
     FKG96_16505
SSDB
Motif
Pfam: SbcC_Walker_B SMC_N AAA_21 AAA_29 ABC_tran
Other DBs
NCBI-ProteinID: QEL02342
UniProt: A0A5C0ZMK5
Position
complement(4005569..4008634)
AA seq 1021 aa
MIPISLTIKGLFSYQKEQTINFARLIEGQLFGIFGSVGSGKSSVLEAIAFALYGETERLS
TRDDRNYNMMNLKSDELLIDFVFSNFDEKQYRFIVKGKRHGKKFEKVNTFDRSAYKFENG
MWQPLEVTTATPLLGLSYENFRRTIIIPQGKFQEFLQLTDKARTEMLKDIFQLDKYDFFQ
QTASLERKNNEVIQRLKGRLSVFEGINETYVGLALQKLQSLAAEVSTMKAELQQRESDLK
EQEILKRLFEDLKTAENSYKQLHLKSSEYQQLKQQLSDYEYCERYFKVNIQRAEELATGI
EKRKESLKEYQYKLKNCETLLMEQQQELANITLKYQSLELLNQKRNDYRTALQILQLKED
IDHLSGRIIKGKEFVHKAQQEKIYREKIALALREKLKKKRNEKLDLNTLSQIKNWFTSRE
HLEKNKKTSQLALDDITGTLKQLESTIDDLLVGVTTPIQNHKESLDTRIKTIDFELDKLS
NEIAHARMQVKLGDFVAALQRGEACPLCGALEHPQVMVLEDVENQLQQLNAKSVHLKDER
NLVQGLIRQLEILDGKKATILKSRDELLFRAESDEQALQVHFQSFIWESTCGRDDARTID
RLLEEHKTAEKELERLELEINENDAILKKAEIDRDQYEIGIQKIVAEERVKVGALNMLTK
QLHNLSEDEVYQYDKNYLENSILDIDSESKAIVDQYEQLQALVQEEQQLKVSLEARFQAV
NENLAAEQERLDFITDQLRGSLSKSKYGSLNEVKNILNLAIAVEEVRSSVDLFFQQLYNA
KEQYTKLATEASDKVYNEELFLRSLSTYEVLRDRFNQEQEKYAAAKADYDRLLKQLEEKQ
QLEDDLARLQHRADNLTILKSLFKGSGFVSYISTVYLQQLCEAANKRFYKLTQQQLRLEV
TDKNEFQVRDYLNDGKTRLAKTLSGGQTFQASLSLALALAESVQQQNRSKQNFFFLDEGF
GSLDRESLAVAFDTLKTLRNENRIVGVISHVEELQQEIDVYLKVKNDPFTGTQISGSWEI
K
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgattccaatttcattaactataaagggacttttttcctatcaaaaggagcaaacgatt
aatttcgctcgactaattgagggacaattattcggcattttcggttccgtgggttcaggc
aaatcatcggttttggaggcgattgcttttgctttgtacggagaaaccgaacgactgagc
acccgggacgatagaaactataacatgatgaacttgaaatcggatgagttgctcattgat
tttgtgttcagcaacttcgacgaaaagcagtatcgatttatcgttaaagggaaacgccat
ggcaagaaatttgagaaagtaaatactttcgatcggtctgcttataagtttgaaaatggt
atgtggcaacctttggaggtaacaactgcgacacctttattgggacttagttacgagaac
tttagacgtaccattattattccacaaggcaaatttcaagagttcttacagctgacagat
aaagcccgaacggaaatgctcaaagatatttttcagctggacaaatatgatttttttcaa
cagaccgcctctttagagcgaaagaacaacgaagtgatccaacgtctaaaaggacgttta
tctgtttttgaaggaataaatgaaacctatgttggtctcgctttgcaaaaattgcaaagc
ttggcagcagaagtctcgacaatgaaggccgagcttcaacagagagaaagcgacctaaaa
gagcaggagatattgaaacgattatttgaggacttaaaaactgctgaaaactcctataag
cagttgcatcttaagtcatcggaatatcagcagttgaaacagcaattgagtgattatgaa
tactgcgaacgttattttaaggtaaatatacaacgagcggaagagctggcaacaggaata
gaaaagcgaaaagaaagcttgaaagaatatcagtataagctcaaaaactgcgaaacatta
ctgatggagcaacagcaagaacttgccaatatcacgttgaaatatcaatcacttgagctc
cttaatcaaaagcgtaacgattatcggactgctttgcaaatattgcagttaaaagaagat
atcgatcatttaagtggacgaattatcaaggggaaagaatttgtccataaagcgcagcag
gagaagatatatcgagaaaaaatagccttagcgcttcgagaaaaactaaaaaagaaacgg
aatgaaaagctggatttgaacaccttatcgcagataaaaaattggtttacttcccgcgag
catttagaaaaaaacaaaaaaacaagccaattagcacttgatgatataactggaacttta
aagcaacttgaaagtaccatcgacgacttacttgttggggtaactactccgatccaaaat
cataaagaatcattagacacacgcataaagaccattgattttgagctcgataagctttca
aatgaaattgcgcatgcccggatgcaagttaaattaggtgattttgtcgcggccttgcag
cgaggtgaagcttgtccgctttgtggagcattggagcaccctcaagttatggtcttagag
gatgtggaaaatcagctccaacaattaaatgctaaatctgtacatctcaaggacgaacgg
aatctcgtgcagggacttatacgccagcttgaaatattagatggaaaaaaagccaccatt
cttaagagtcgggacgaactcctttttagggccgagtcagacgaacaggcattacaagta
catttccaatcctttatttgggaatctacttgcggtagagacgatgcccgcactattgat
cggttacttgaagaacacaaaaccgcagaaaaagagttggaacgactggaactggagatt
aatgaaaatgatgccattttgaaaaaagcagaaatagatagagatcaatatgaaatcgga
atacaaaaaatagtagcagaagaacgagtaaaggttggggccttaaatatgctcacgaaa
caacttcacaacttatctgaagatgaagtttatcaatatgataaaaactatctggaaaac
agtattttagatatagatagtgaaagtaaagctattgtcgatcaatacgagcaacttcaa
gctttggtacaggaggagcaacagctaaaagtatcgttggaagcaagatttcaggcagtc
aatgaaaacttagctgccgagcaggaacgtctggactttattactgatcagttacgaggt
tctttaagtaaatcgaagtatggcagtttgaatgaagttaaaaatatattaaatctagca
attgctgtagaagaggtccgaagcagtgtagacctattcttccaacaattatataatgcg
aaagaacaatataccaagctagctacggaggctagcgataaagtttacaatgaggagctg
tttctaaggtcattaagcacttatgaagtgctcagggatcgattcaatcaagaacaagag
aaatatgctgctgccaaagcagattacgataggcttctaaagcaactcgaagaaaaacaa
caactagaagacgatttggcgcgtttacagcatcgagcagataacctgactattcttaaa
agcctatttaaaggaagtggctttgttagttatatatccacggtttacttacaacaatta
tgtgaggcagcgaacaagcgtttttataagcttacacagcagcaattgcgactggaggta
accgataaaaatgaatttcaggtaagagattacttaaatgatggtaaaaccagattagcc
aagaccttgtccggcggccagacttttcaggcttcattgtcgctagccttagctcttgcg
gaatctgtacaacaacaaaatcgatccaagcaaaattttttctttttagatgaaggcttt
ggttctttagatcgggaatcattggcagtggcgtttgatacgttgaaaacattacgaaac
gaaaatagaattgtgggggttatttctcacgtagaggagttacagcaggaaatagatgtt
tatctaaaggttaaaaatgatccttttacgggcactcaaataagtggaagttgggaaatt
aaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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